Description(s) found:
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gi|7301513|gb|AAF56635.1| rough, isoform A [Drosophila melanogaster]
[NCBI NR]
gi|66571144|gb|AAY51537.1| IP01518p [Drosophila melanogaster]
[NCBI NR]
gi|24650428|ref|NP_733173.1| rough, isoform B [Drosophila melanogaster]
[NCBI NR]
gi|23172393|gb|AAN14093.1| rough, isoform B [Drosophila melanogaster]
[NCBI NR]
gi|17738231|ref|NP_524521.1| rough, isoform A [Drosophila melanogaster]
[NCBI NR]
gi|14286139|sp|P10181.4|ROUGH_DROME RecName: Full=Homeobox protein rough
[NCBI NR]
Homeobox protein rough OS=Drosophila melanogaster GN=ro PE=2 SV=4
[Swiss-Prot]
(P10181) Homeobox protein rough
[Swiss-Prot]
The gene rough is referred to in FlyBase by the symbol Dmel\ro (CG6348, FBgn0003267). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:22702493..22706893. It has the cytological map location 97D4-97D5. Based on sequence similarity, it is predicted to have molecular function</span>: transcription factor activity. Based on sequence similarity, it is predicted to be involved in the biological process</span>: regulation of transcription, DNA-dependent. 70 alleles are reported. The phenotypes of these alleles are annotated with: photoreceptor cell R7; eye; retina; macrochaeta; primary pigment cell; cone cell; eye photoreceptor cell; lens; ommatidium; morphogenetic furrow. It has 2 annotated transcripts and 2 annotated polypeptides.
[FlyBase]
>CG6348-PA translation from_gene[CG6348 ro FBgn0003267] seq_release:3 mol_weight=39430 cds_boundaries:(3R:22,691,983..22,696,192[-]) aa_length:350 transcript_info:[CG6348-RA seq_release:3] gene_info:[gene symbol:ro FBgn0003267 gene_boundaries:(3R:22,69
[hmr_yeast5_DM3-1_pombe.fasta]
>CG6348-PB translation from_gene[CG6348 ro FBgn0003267] seq_release:3 mol_weight=39430 cds_boundaries:(3R:22,691,983..22,696,192[-]) aa_length:350 transcript_info:[CG6348-RB seq_release:3] gene_info:[gene symbol:ro FBgn0003267 gene_boundaries:(3R:22,69
[hmr_yeast5_DM3-1_pombe.fasta]
(AE003758) ro gene product [Drosophila melanogaster]
[yeastflysequest.fasta]
CG6348-PB, isoform B [Drosophila melanogaster]gi|7301513|gb|AAF56635.1| CG6348-PA, isoform A [Drosophila melanogaster]gi|24650428|ref|NP_733173.1| CG6348-PB [Drosophila melanogaster]gi|17738231|ref|NP_524521.1| CG6348-PA [Drosophila melanogaster]gi|14
[nrdb_11152004_Chlamydomonas]
type=protein; loc=3R:complement(22702615..22702891,22703264..22703498,22706287..22706827); ID=FBpp0084460; name=ro-PA; parent=FBgn0003267,FBtr0085090; dbxref=FlyBase:FBpp0084460,FlyBase_Annotation_IDs:CG6348-PA,GB_protein:AAF56635.1,REFSEQ:NP_524521,GB_pr
[fly-100309-contam.fasta]
type=protein; loc=3R:complement(22702615..22702891,22703264..22703498,22706287..22706827); ID=FBpp0084461; name=ro-PB; parent=FBgn0003267,FBtr0085091; dbxref=FlyBase:FBpp0084461,FlyBase_Annotation_IDs:CG6348-PB,GB_protein:AAN14093.1,REFSEQ:NP_733173,GB_pr
[fly-100309-contam.fasta]
rough CG6348-PA, isoform A [Drosophila melanogaster]
[nr-271106-contam.fasta]
Homeobox protein rough
[nr-271106-contam.fasta]
rough CG6348-PB, isoform B [Drosophila melanogaster]
[nr-271106-contam.fasta]
IP01518p [Drosophila melanogaster]
[nr-271106-contam.fasta]
CG6348-PA, isoform A [Drosophila melanogaster]
[nr-271106-contam.fasta]
CG6348-PB, isoform B [Drosophila melanogaster]
[nr-271106-contam.fasta]
type=protein; loc=3R:complement(22702615..22702891,22703264..22703498,22706287..22706827); ID=FBpp0084460; name=ro-PA; parent=FBgn0003267,FBtr0085090; dbxref=FlyBase:FBpp0084460,FlyBase_Annotation_IDs:CG6348-PA,GB_protein:AAF56635.1,REFSEQ:NP_524521,GB_protein:AAF56635; MD5=eeb61dc52dd0209d593b44c94523b499; length=350; release=r5.16; species=Dmel;
[fly-contam-His-TEV-Tub4complex.fasta]
type=protein; loc=3R:complement(22702615..22702891,22703264..22703498,22706287..22706827); ID=FBpp0084461; name=ro-PB; parent=FBgn0003267,FBtr0085091; dbxref=FlyBase:FBpp0084461,FlyBase_Annotation_IDs:CG6348-PB,GB_protein:AAN14093.1,REFSEQ:NP_733173,GB_protein:AAN14093; MD5=eeb61dc52dd0209d593b44c94523b499; length=350; release=r5.16; species=Dmel;
[fly-contam-His-TEV-Tub4complex.fasta]
type=protein; loc=3R:complement(22702615..22702891,22703264..22703498,22706287..22706827); ID=FBpp0084460; name=ro-PA; parent=FBgn0003267,FBtr0085090; dbxref=FlyBase:FBpp0084460,FlyBase_Annotation_IDs:CG6348-PA,GB_protein:AAF56635.1,REFSEQ:NP_524521,GB_protein:AAF56635; MD5=eeb61dc52dd0209d593b44c94523b499; length=350; release=r5.21; species=Dmel;
[Other_drosophila_na_09-09-2009_reversed.fasta]
type=protein; loc=3R:complement(22702615..22702891,22703264..22703498,22706287..22706827); ID=FBpp0084461; name=ro-PB; parent=FBgn0003267,FBtr0085091; dbxref=FlyBase:FBpp0084461,FlyBase_Annotation_IDs:CG6348-PB,GB_protein:AAN14093.1,REFSEQ:NP_733173,GB_protein:AAN14093; MD5=eeb61dc52dd0209d593b44c94523b499; length=350; release=r5.21; species=Dmel;
[Other_drosophila_na_09-09-2009_reversed.fasta]
type=protein; loc=3R:complement(22702615..22702891,22703264..22703498,22706287..22706827); ID=FBpp0084460; name=ro-PA; parent=FBgn0003267,FBtr0085090; dbxref=FlyBase:FBpp0084460,FlyBase_Annotation_IDs:CG6348-PA,GB_protein:AAF56635.1,REFSEQ:NP_524521,GB_protein:AAF56635; MD5=eeb61dc52dd0209d593b44c94523b499; length=350; release=r5.46; species=Dmel;
[fly-062812-sfps-sandra-contam.fasta]
type=protein; loc=3R:complement(22702615..22702891,22703264..22703498,22706287..22706827); ID=FBpp0084461; name=ro-PB; parent=FBgn0003267,FBtr0085091; dbxref=FlyBase:FBpp0084461,FlyBase_Annotation_IDs:CG6348-PB,GB_protein:AAN14093.1,REFSEQ:NP_733173,GB_protein:AAN14093,FlyMine:FBpp0084461,modMine:FBpp0084461; MD5=eeb61dc52dd0209d593b44c94523b499; length=350; release=r5.46; species=Dmel;
[fly-062812-sfps-sandra-contam.fasta]
type=protein; loc=3R:complement(join(26880565..26881105,26877542..26877776,26876893..26877169)); ID=FBpp0084460; name=ro-PA; parent=FBgn0003267,FBtr0085090; dbxref=FlyBase:FBpp0084460,FlyBase_Annotation_IDs:CG6348-PA,GB_protein:AAF56635.1,REFSEQ:NP_524521,GB_protein:AAF56635; MD5=eeb61dc52dd0209d593b44c94523b499; length=350; release=r6.02; species=Dmel;
[fly-2014-05-contam.fasta]
type=protein; loc=3R:complement(join(26880565..26881105,26877542..26877776,26876893..26877169)); ID=FBpp0084461; name=ro-PB; parent=FBgn0003267,FBtr0085091; dbxref=FlyBase:FBpp0084461,FlyBase_Annotation_IDs:CG6348-PB,GB_protein:AAN14093.1,REFSEQ:NP_733173,GB_protein:AAN14093,FlyMine:FBpp0084461,modMine:FBpp0084461; MD5=eeb61dc52dd0209d593b44c94523b499; length=350; release=r6.02; species=Dmel;
[fly-2014-05-contam.fasta]
type=protein; loc=3R:complement(join(26880565..26881105,26877542..26877776,26876893..26877169)); ID=FBpp0084460; name=ro-PA; parent=FBgn0003267,FBtr0085090; dbxref=FlyBase:FBpp0084460,FlyBase_Annotation_IDs:CG6348-PA,GB_protein:AAF56635.1,REFSEQ:NP_524521,GB_protein:AAF56635; MD5=eeb61dc52dd0209d593b44c94523b499; length=350; release=r6.07; species=Dmel;
[fly-08202015-contam.fasta]
type=protein; loc=3R:complement(join(26880565..26881105,26877542..26877776,26876893..26877169)); ID=FBpp0084461; name=ro-PB; parent=FBgn0003267,FBtr0085091; dbxref=FlyBase:FBpp0084461,FlyBase_Annotation_IDs:CG6348-PB,GB_protein:AAN14093.1,REFSEQ:NP_733173,GB_protein:AAN14093,FlyMine:FBpp0084461,modMine:FBpp0084461; MD5=eeb61dc52dd0209d593b44c94523b499; length=350; release=r6.07; species=Dmel;
[fly-08202015-contam.fasta]
FBpp0084460 type=protein; loc=3R:complement(join(26880565..26881105,26877542..26877776,26876893..26877169)); ID=FBpp0084460; name=ro-PA; parent=FBgn0003267,FBtr0085090; dbxref=FlyBase:FBpp0084460,FlyBase_Annotation_IDs:CG6348-PA,GB_protein:AAF56635.1,REFSEQ:NP_524521,GB_protein:AAF56635; MD5=eeb61dc52dd0209d593b44c94523b499; length=350; release=r6.09; species=Dmel;
[dmel-all-translation-r6.09.fasta]
FBpp0084461 type=protein; loc=3R:complement(join(26880565..26881105,26877542..26877776,26876893..26877169)); ID=FBpp0084461; name=ro-PB; parent=FBgn0003267,FBtr0085091; dbxref=FlyBase:FBpp0084461,FlyBase_Annotation_IDs:CG6348-PB,GB_protein:AAN14093.1,REFSEQ:NP_733173,GB_protein:AAN14093,FlyMine:FBpp0084461,modMine:FBpp0084461; MD5=eeb61dc52dd0209d593b44c94523b499; length=350; release=r6.09; species=Dmel;
[dmel-all-translation-r6.09.fasta]
[fly-122215-dmel-6-09-contam.fasta]
type=protein; loc=3R:complement(join(26880565..26881105,26877542..26877776,26876893..26877169)); ID=FBpp0084460; name=ro-PA; parent=FBgn0003267,FBtr0085090; dbxref=FlyBase:FBpp0084460,FlyBase_Annotation_IDs:CG6348-PA,GB_protein:AAF56635.1,REFSEQ:NP_524521,GB_protein:AAF56635,UniProt/Swiss-Prot:P10181; MD5=eeb61dc52dd0209d593b44c94523b499; length=350; release=r6.14; species=Dmel;
[fly-dmel-jan2017-sandracontam.fasta]
type=protein; loc=3R:complement(join(26880565..26881105,26877542..26877776,26876893..26877169)); ID=FBpp0084461; name=ro-PB; parent=FBgn0003267,FBtr0085091; dbxref=FlyBase:FBpp0084461,FlyBase_Annotation_IDs:CG6348-PB,GB_protein:AAN14093.1,REFSEQ:NP_733173,GB_protein:AAN14093,UniProt/Swiss-Prot:P10181,FlyMine:FBpp0084461,modMine:FBpp0084461; MD5=eeb61dc52dd0209d593b44c94523b499; length=350; release=r6.14; species=Dmel;
[fly-dmel-jan2017-sandracontam.fasta]
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