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Protein Overview: CG18596-PA

General Information:
Name(s) found: CG18596-PA / FBpp0083613 [FlyBase]
Description(s) found:
Found 20 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG18596 (CG18596, FBgn0038953). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:18201667..18205681. It has the cytological map location 94A6. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: RNA binding; RNA methyltransferase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: RNA processing. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 1136 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: RNA processing [IEA]
    Molecular Function: RNA methyltransferase activity [IEA]
    RNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLPTTRATT ATTTHAVVQA VETYIQNQNL LGEIAELDDM LYDLVSMHKD NELALKRVLQ  60
   61 CIHNLLQTNS KYNVRFGPKV FHKLVSVVIA DSREDSASRR QLVANLLVCV QLHIRKFPRI 120
  121 EAKFVLQQLW SLSQSNERQP HAAQILVHLF DDFVNNLGTE CAQELLVLTR NLLQSDVRDD 180
  181 RRSAYFLMHK LQEIDEVLAA LQCSEVQWSA YVGIMENLEE QQSHLVLPTL STLLPRMGLM 240
  241 SNNLSEDWLD WLRILCIRLL GDNNILVLRW TLKYFLSHFS LEQISRFNLL TQFLAATNRT 300
  301 QLYNPEVPDC LTKQQITDFS AQFPAEILLE ALVCVPWHAV PLIHWLQAWE LKQLPVVSKE 360
  361 LLFKLGARVR SLQNPVLRGE AINYVIFSLS ATIDSLSLGD YLLFMESLYN TIDRYQSHSQ 420
  421 LAQKIRNCSN LEKHIASFNI RCCELVSQMD YKHDVFVAFL EKLRTVPKSK HGWWRLLPIF 480
  481 LHRELDHPEQ YLDFYRSVYD LDTSFLESGV SLEQMQQHLL NRLDCQTREE KSFVLEHSVD 540
  541 LFVQINLPTW SKLEVLNLNP LELLDRGTEE TFATLSNILS THDEQLADQN VLPAFISRLG 600
  601 KLKVRETQAI LKYAVQNLSS EEYEKCVVDV LEKNTFLLGT MDCEEYIKAP TSFVIKRMLQ 660
  661 GETTTGDARI ERAFEQISDT GAMDRVQFIQ YAKNSTGLDI SFICDDLLRM NNELSRKKPR 720
  721 YFANCKEHRM KMRIGKALLD LSDRWKWSDN LWEAVLCPSD QPNISFMYEY LVSKMLPSID 780
  781 LLLEQLKLLA TLKPSQQISL VSVVHIYCLT RWESIQHEQL VEVFAVLLPL TMGANFQTRL 840
  841 LAQLVLHRIC SECEDRSIQM PIADALKKSI KVTLSEKLTE FQCEARLLLP ELGKQCPTSV 900
  901 SDCILMMTNA PFDENISFIS CSYDFRMKLK RALETFKRKQ SVLIPELATS LAALNGNVQR 960
  961 KMNPVGDIYP ESDFVVSNKA RDDHELIVVA SLIDKLPNLG GLARTCEVLG VNTLILGLKS1020
 1021 QAEKSDFTNL SMTAEKTLNI LEVNPESLAG FLLEKQMEGY KIVGAEQTAH STNFVDFKFP1080
 1081 KKSILLLGHE KHGIPANLIG FLDYAVEIPQ YGLVRSLNVH VAGSLFIWEY CKQHLN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..137] deduced N/A No confident structure predictions are available.
    2 View Details [138..304] deduced N/A No confident structure predictions are available.
    3 View Details [305..482] deduced N/A No confident structure predictions are available.
    4 View Details [483..582] deduced N/A No confident structure predictions are available.
    5 View Details [583..662] deduced N/A No confident structure predictions are available.
    6 View Details [663..873] MSA 1.049985 View MSA. No confident structure predictions are available.
    7 View Details [874..978] deduced N/A No confident structure predictions are available.
    8 View Details [979..1136] PSI-BLAST 30.30103 No description for 2ha8A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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