YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG18596-PA
Protein type: Globular with Signal Peptide
Type Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLPTTRATT ATTTHAVVQA VETYIQNQNL LGEIAELDDM LYDLVSMHKD NELALKRVLQ  60
   61 CIHNLLQTNS KYNVRFGPKV FHKLVSVVIA DSREDSASRR QLVANLLVCV QLHIRKFPRI 120
  121 EAKFVLQQLW SLSQSNERQP HAAQILVHLF DDFVNNLGTE CAQELLVLTR NLLQSDVRDD 180
  181 RRSAYFLMHK LQEIDEVLAA LQCSEVQWSA YVGIMENLEE QQSHLVLPTL STLLPRMGLM 240
  241 SNNLSEDWLD WLRILCIRLL GDNNILVLRW TLKYFLSHFS LEQISRFNLL TQFLAATNRT 300
  301 QLYNPEVPDC LTKQQITDFS AQFPAEILLE ALVCVPWHAV PLIHWLQAWE LKQLPVVSKE 360
  361 LLFKLGARVR SLQNPVLRGE AINYVIFSLS ATIDSLSLGD YLLFMESLYN TIDRYQSHSQ 420
  421 LAQKIRNCSN LEKHIASFNI RCCELVSQMD YKHDVFVAFL EKLRTVPKSK HGWWRLLPIF 480
  481 LHRELDHPEQ YLDFYRSVYD LDTSFLESGV SLEQMQQHLL NRLDCQTREE KSFVLEHSVD 540
  541 LFVQINLPTW SKLEVLNLNP LELLDRGTEE TFATLSNILS THDEQLADQN VLPAFISRLG 600
  601 KLKVRETQAI LKYAVQNLSS EEYEKCVVDV LEKNTFLLGT MDCEEYIKAP TSFVIKRMLQ 660
  661 GETTTGDARI ERAFEQISDT GAMDRVQFIQ YAKNSTGLDI SFICDDLLRM NNELSRKKPR 720
  721 YFANCKEHRM KMRIGKALLD LSDRWKWSDN LWEAVLCPSD QPNISFMYEY LVSKMLPSID 780
  781 LLLEQLKLLA TLKPSQQISL VSVVHIYCLT RWESIQHEQL VEVFAVLLPL TMGANFQTRL 840
  841 LAQLVLHRIC SECEDRSIQM PIADALKKSI KVTLSEKLTE FQCEARLLLP ELGKQCPTSV 900
  901 SDCILMMTNA PFDENISFIS CSYDFRMKLK RALETFKRKQ SVLIPELATS LAALNGNVQR 960
  961 KMNPVGDIYP ESDFVVSNKA RDDHELIVVA SLIDKLPNLG GLARTCEVLG VNTLILGLKS1020
 1021 QAEKSDFTNL SMTAEKTLNI LEVNPESLAG FLLEKQMEGY KIVGAEQTAH STNFVDFKFP1080
 1081 KKSILLLGHE KHGIPANLIG FLDYAVEIPQ YGLVRSLNVH VAGSLFIWEY CKQHLN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle