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View Structure Prediction Details

Protein: CG18596-PA
Organism: Drosophila melanogaster
Length: 1136 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG18596-PA.

Description E-value Query
Range
Subject
Range
gi|54638474, gi|... - gi|54638474|gb|EAL27876.1| GA15007-PA [Drosophila pseudoobscura], gi|125774963|ref|XP_001358733.1| G...
1413.0 [0..1] [1134..1]

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Predicted Domain #1
Region A:
Residues: [1-137]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLPTTRATT ATTTHAVVQA VETYIQNQNL LGEIAELDDM LYDLVSMHKD NELALKRVLQ  60
   61 CIHNLLQTNS KYNVRFGPKV FHKLVSVVIA DSREDSASRR QLVANLLVCV QLHIRKFPRI 120
  121 EAKFVLQQLW SLSQSNE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [138-304]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RQPHAAQILV HLFDDFVNNL GTECAQELLV LTRNLLQSDV RDDRRSAYFL MHKLQEIDEV  60
   61 LAALQCSEVQ WSAYVGIMEN LEEQQSHLVL PTLSTLLPRM GLMSNNLSED WLDWLRILCI 120
  121 RLLGDNNILV LRWTLKYFLS HFSLEQISRF NLLTQFLAAT NRTQLYN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [305-482]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PEVPDCLTKQ QITDFSAQFP AEILLEALVC VPWHAVPLIH WLQAWELKQL PVVSKELLFK  60
   61 LGARVRSLQN PVLRGEAINY VIFSLSATID SLSLGDYLLF MESLYNTIDR YQSHSQLAQK 120
  121 IRNCSNLEKH IASFNIRCCE LVSQMDYKHD VFVAFLEKLR TVPKSKHGWW RLLPIFLH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [483-582]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RELDHPEQYL DFYRSVYDLD TSFLESGVSL EQMQQHLLNR LDCQTREEKS FVLEHSVDLF  60
   61 VQINLPTWSK LEVLNLNPLE LLDRGTEETF ATLSNILSTH 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [583-662]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DEQLADQNVL PAFISRLGKL KVRETQAILK YAVQNLSSEE YEKCVVDVLE KNTFLLGTMD  60
   61 CEEYIKAPTS FVIKRMLQGE 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [663-873]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TTTGDARIER AFEQISDTGA MDRVQFIQYA KNSTGLDISF ICDDLLRMNN ELSRKKPRYF  60
   61 ANCKEHRMKM RIGKALLDLS DRWKWSDNLW EAVLCPSDQP NISFMYEYLV SKMLPSIDLL 120
  121 LEQLKLLATL KPSQQISLVS VVHIYCLTRW ESIQHEQLVE VFAVLLPLTM GANFQTRLLA 180
  181 QLVLHRICSE CEDRSIQMPI ADALKKSIKV T

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [874-978]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LSEKLTEFQC EARLLLPELG KQCPTSVSDC ILMMTNAPFD ENISFISCSY DFRMKLKRAL  60
   61 ETFKRKQSVL IPELATSLAA LNGNVQRKMN PVGDIYPESD FVVSN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #8
Region A:
Residues: [979-1136]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KARDDHELIV VASLIDKLPN LGGLARTCEV LGVNTLILGL KSQAEKSDFT NLSMTAEKTL  60
   61 NILEVNPESL AGFLLEKQME GYKIVGAEQT AHSTNFVDFK FPKKSILLLG HEKHGIPANL 120
  121 IGFLDYAVEI PQYGLVRSLN VHVAGSLFIW EYCKQHLN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.30103
Match: 2ha8A
Description: No description for 2ha8A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle