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View Structure Prediction Details

Protein: CG18596-PA
Organism: Drosophila melanogaster
Length: 1136 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG18596-PA.

Description E-value Query
Range
Subject
Range
gi|54638474, gi|... - gi|54638474|gb|EAL27876.1| GA15007-PA [Drosophila pseudoobscura], gi|125774963|ref|XP_001358733.1| G...
1413.0 [0..1] [1134..1]

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Predicted Domain #1
Region A:
Residues: [1-137]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLPTTRATT ATTTHAVVQA VETYIQNQNL LGEIAELDDM LYDLVSMHKD NELALKRVLQ  60
   61 CIHNLLQTNS KYNVRFGPKV FHKLVSVVIA DSREDSASRR QLVANLLVCV QLHIRKFPRI 120
  121 EAKFVLQQLW SLSQSNE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [138-304]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RQPHAAQILV HLFDDFVNNL GTECAQELLV LTRNLLQSDV RDDRRSAYFL MHKLQEIDEV  60
   61 LAALQCSEVQ WSAYVGIMEN LEEQQSHLVL PTLSTLLPRM GLMSNNLSED WLDWLRILCI 120
  121 RLLGDNNILV LRWTLKYFLS HFSLEQISRF NLLTQFLAAT NRTQLYN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [305-482]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PEVPDCLTKQ QITDFSAQFP AEILLEALVC VPWHAVPLIH WLQAWELKQL PVVSKELLFK  60
   61 LGARVRSLQN PVLRGEAINY VIFSLSATID SLSLGDYLLF MESLYNTIDR YQSHSQLAQK 120
  121 IRNCSNLEKH IASFNIRCCE LVSQMDYKHD VFVAFLEKLR TVPKSKHGWW RLLPIFLH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [483-582]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RELDHPEQYL DFYRSVYDLD TSFLESGVSL EQMQQHLLNR LDCQTREEKS FVLEHSVDLF  60
   61 VQINLPTWSK LEVLNLNPLE LLDRGTEETF ATLSNILSTH 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [583-662]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DEQLADQNVL PAFISRLGKL KVRETQAILK YAVQNLSSEE YEKCVVDVLE KNTFLLGTMD  60
   61 CEEYIKAPTS FVIKRMLQGE 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [663-873]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TTTGDARIER AFEQISDTGA MDRVQFIQYA KNSTGLDISF ICDDLLRMNN ELSRKKPRYF  60
   61 ANCKEHRMKM RIGKALLDLS DRWKWSDNLW EAVLCPSDQP NISFMYEYLV SKMLPSIDLL 120
  121 LEQLKLLATL KPSQQISLVS VVHIYCLTRW ESIQHEQLVE VFAVLLPLTM GANFQTRLLA 180
  181 QLVLHRICSE CEDRSIQMPI ADALKKSIKV T

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [874-978]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LSEKLTEFQC EARLLLPELG KQCPTSVSDC ILMMTNAPFD ENISFISCSY DFRMKLKRAL  60
   61 ETFKRKQSVL IPELATSLAA LNGNVQRKMN PVGDIYPESD FVVSN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #8
Region A:
Residues: [979-1136]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KARDDHELIV VASLIDKLPN LGGLARTCEV LGVNTLILGL KSQAEKSDFT NLSMTAEKTL  60
   61 NILEVNPESL AGFLLEKQME GYKIVGAEQT AHSTNFVDFK FPKKSILLLG HEKHGIPANL 120
  121 IGFLDYAVEI PQYGLVRSLN VHVAGSLFIW EYCKQHLN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.30103
Match: 2ha8A
Description: No description for 2ha8A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle