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Protein Overview: glo-PC

General Information:
Name(s) found: glo-PC / FBpp0088857 [FlyBase]
Description(s) found:
Found 19 descriptions.
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  • The gene glorund is referred to in FlyBase by the symbol Dmel\glo (CG6946, FBgn0259139). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:7640928..7645142. It has the cytological map location 86F8-86F9. There is experimental evidence that it has the molecular function</span>: protein binding. There is experimental evidence that it is involved in the biological process</span>: regulation of translation; intracellular mRNA localization involved in pattern specification process; pole plasm oskar mRNA localization; maternal specification of dorsal/ventral axis, oocyte, germ-line encoded; chromosome organization; oogenesis. 10 alleles are reported. No phenotypic data is available. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 179 amino acids

    Gene Ontology:
    Cellular Component: protein complex [IPI]
    Biological Process: regulation of translation [IMP][NAS]
    oogenesis [IMP]
    chromosome organization [IMP]
    pole plasm oskar mRNA localization [IMP]
    maternal specification of dorsal/ventral axis, oocyte, germ-line encoded [IMP]
    intracellular mRNA localization involved in pattern specification process [IMP]
    Molecular Function: nucleotide binding [IEA]
    nucleic acid binding [IEA]
    protein binding [IPI]
    mRNA binding [ISS][NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNADVQFNY GQQGNGDNFN DDSNQQQDED DQYNEDGGGK IENVGESPKF VRLRGLPWSA  60
   61 THKEILDFLE NVNVTNGSAG IHLVTSRVDG KNTGEAYVEV ASQEDVEEAR KLNKASMGHR 120
  121 YIEVFTATPK EAKEAMRKIS GHGTAFVVKL RGLPYAVTEQ QIEEFFSGIL RYSAARLLK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..179] PSI-BLAST 34.0 HNRNP A1 (RBD1,2) FROM HOMO SAPIENS

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.950788308762215 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.29562225149076 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle