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Protein Overview: CG3162-PA

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..104] deduced N/A No confident structure predictions are available.
2 View Details [105..238] PSI-BLAST 11.30103 Splicing factor U2AF 65 KDa subunit
3 View Details [239..326] PSI-BLAST 16.69897 Splicing factor U2AF 65 KDa subunit
4 View Details [327..449] PSI-BLAST 13.221849 Splicing factor U2AF 65 KDa subunit

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2
Term Confidence Notes
  • RNA binding
  • 6.73097473547076 bayes_pls_golite062009
  • 6.62953239642182 bayes_pls_golite062009
  • mRNA binding
  • 5.29759606920196 bayes_pls_golite062009
  • nucleic acid binding
  • 4.92126426323641 bayes_pls_golite062009
  • snRNA binding
  • 4.06596327298973 bayes_pls_golite062009
  • binding
  • 3.64400841800969 bayes_pls_golite062009
  • poly-pyrimidine tract binding
  • 3.11990160533699 bayes_pls_golite062009
  • U1 snRNA binding
  • 3.02511982045347 bayes_pls_golite062009
  • single-stranded RNA binding
  • 2.93798024346416 bayes_pls_golite062009
  • transcription regulator activity
  • 1.92450390013691 bayes_pls_golite062009
  • DNA binding
  • 1.8021593476478 bayes_pls_golite062009
  • structural molecule activity
  • 1.29928829870122 bayes_pls_golite062009
  • transcription factor activity
  • 1.15127506309683 bayes_pls_golite062009
  • protein binding
  • 1.12215421354121 bayes_pls_golite062009
  • mRNA 3'-UTR binding
  • 0.591700155096213 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
  • 0.425042944899091 bayes_pls_golite062009
  • transporter activity
  • 0.417047632648771 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 0.383589644462932 bayes_pls_golite062009
  • cytoskeletal protein binding
  • 0.288834004308736 bayes_pls_golite062009
  • transmembrane transporter activity
  • 0.288804044686487 bayes_pls_golite062009
  • snoRNA binding
  • 0.0568636182001701 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
  • 0.00171911393626201 bayes_pls_golite062009
    3
    Term Confidence Notes
  • RNA binding
  • 6.73097473547076 bayes_pls_golite062009
  • 6.62953239642182 bayes_pls_golite062009
  • mRNA binding
  • 5.29759606920196 bayes_pls_golite062009
  • nucleic acid binding
  • 4.92126426323641 bayes_pls_golite062009
  • snRNA binding
  • 4.06596327298973 bayes_pls_golite062009
  • binding
  • 3.64400841800969 bayes_pls_golite062009
  • poly-pyrimidine tract binding
  • 3.11990160533699 bayes_pls_golite062009
  • U1 snRNA binding
  • 3.02511982045347 bayes_pls_golite062009
  • single-stranded RNA binding
  • 2.93798024346416 bayes_pls_golite062009
  • transcription regulator activity
  • 1.92450390013691 bayes_pls_golite062009
  • DNA binding
  • 1.8021593476478 bayes_pls_golite062009
  • structural molecule activity
  • 1.29928829870122 bayes_pls_golite062009
  • transcription factor activity
  • 1.15127506309683 bayes_pls_golite062009
  • protein binding
  • 1.12215421354121 bayes_pls_golite062009
  • mRNA 3'-UTR binding
  • 0.591700155096213 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
  • 0.425042944899091 bayes_pls_golite062009
  • transporter activity
  • 0.417047632648771 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 0.383589644462932 bayes_pls_golite062009
  • cytoskeletal protein binding
  • 0.288834004308736 bayes_pls_golite062009
  • transmembrane transporter activity
  • 0.288804044686487 bayes_pls_golite062009
  • snoRNA binding
  • 0.0568636182001701 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
  • 0.00171911393626201 bayes_pls_golite062009
    4
    Term Confidence Notes
  • RNA binding
  • 6.73097473547076 bayes_pls_golite062009
  • 6.62953239642182 bayes_pls_golite062009
  • mRNA binding
  • 5.29759606920196 bayes_pls_golite062009
  • nucleic acid binding
  • 4.92126426323641 bayes_pls_golite062009
  • snRNA binding
  • 4.06596327298973 bayes_pls_golite062009
  • binding
  • 3.64400841800969 bayes_pls_golite062009
  • poly-pyrimidine tract binding
  • 3.11990160533699 bayes_pls_golite062009
  • U1 snRNA binding
  • 3.02511982045347 bayes_pls_golite062009
  • single-stranded RNA binding
  • 2.93798024346416 bayes_pls_golite062009
  • transcription regulator activity
  • 1.92450390013691 bayes_pls_golite062009
  • DNA binding
  • 1.8021593476478 bayes_pls_golite062009
  • structural molecule activity
  • 1.29928829870122 bayes_pls_golite062009
  • transcription factor activity
  • 1.15127506309683 bayes_pls_golite062009
  • protein binding
  • 1.12215421354121 bayes_pls_golite062009
  • mRNA 3'-UTR binding
  • 0.591700155096213 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
  • 0.425042944899091 bayes_pls_golite062009
  • transporter activity
  • 0.417047632648771 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 0.383589644462932 bayes_pls_golite062009
  • cytoskeletal protein binding
  • 0.288834004308736 bayes_pls_golite062009
  • transmembrane transporter activity
  • 0.288804044686487 bayes_pls_golite062009
  • snoRNA binding
  • 0.0568636182001701 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
  • 0.00171911393626201 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle