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Protein Overview: CG30354-PA, FBpp...

General Information:
Name(s) found: FBpp0305217 [FlyBase]
CG30354-PA / FBpp0087782 [FlyBase]
Description(s) found:
Found 26 descriptions.
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  • type=protein; loc=2R:4564840..4565100; ID=FBpp0305217; name=CG30354-PB; parent=FBgn0050354,FBtr0333002; dbxref=REFSEQ:NP_001260811,GB_protein:AGB93344,FlyBase:FBpp0305217,FlyBase_Annotation_IDs:CG30354-PB; MD5=5eecea45b471cbac670ae14578e9b361; length=86; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG30354 (CG30354, FBgn0050354). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:4564730..4565166. It has the cytological map location 44E2. Based on sequence similarity, it is predicted to have molecular function</span>: ubiquinol-cytochrome-c reductase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: mitochondrial electron transport, ubiquinol to cytochrome c. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 86 amino acids

    Gene Ontology:
    Cellular Component: mitochondrial respiratory chain complex III [ISS]
    Biological Process: mitochondrial electron transport, ubiquinol to cytochrome c [IEA]
    Molecular Function: ubiquinol-cytochrome-c reductase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFNSRVLVP VLKADDDEKE LVDPQAALRE KCQAKGHIAS LYNKYQECND RVNGKSKTTE  60
   61 TCMEELFDFV AELDHCVAHS LFSKLK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..86] PSI-BLAST 19.522879 Nonheme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ubiquinol-cytochrome-c reductase activity
    		•  5.13527825719616 bayes_pls_golite062009
  • oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor
    		•  5.13527825719616 bayes_pls_golite062009
  • oxidoreductase activity, acting on diphenols and related substances as donors
    		•  4.75176073322343 bayes_pls_golite062009
  • oxidoreductase activity
    		•  2.47652001172123 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  0.24479869632018 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  0.19264333431827 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  0.16010789619236 bayes_pls_golite062009
  • binding
    		•  0.154122775893975 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.14361122628731 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.03388672035275 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.0278206012367701 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle