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View Structure Prediction Details

Protein: CG30354-PA, FBpp...
Organism: Drosophila melanogaster
Length: 86 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG30354-PA, FBpp....

Description E-value Query
Range
Subject
Range
gi|114556340 - gi|114556340|ref|XP_001160694.1| PREDICTED: similar to Ubiquinol-cytochrome c reductase hinge protei...
108.0 [0..23] [86..114]

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Predicted Domain #1
Region A:
Residues: [1-86]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFNSRVLVP VLKADDDEKE LVDPQAALRE KCQAKGHIAS LYNKYQECND RVNGKSKTTE  60
   61 TCMEELFDFV AELDHCVAHS LFSKLK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 19.522879
Match: 1bccH
Description: Nonheme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
ubiquinol-cytochrome-c reductase activity 5.13527825719616 bayes_pls_golite062009
oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor 5.13527825719616 bayes_pls_golite062009
oxidoreductase activity, acting on diphenols and related substances as donors 4.75176073322343 bayes_pls_golite062009
oxidoreductase activity 2.47652001172123 bayes_pls_golite062009
hydrogen ion transmembrane transporter activity 0.24479869632018 bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity 0.19264333431827 bayes_pls_golite062009
cation transmembrane transporter activity 0.16010789619236 bayes_pls_golite062009
binding 0.154122775893975 bayes_pls_golite062009
ion transmembrane transporter activity 0.14361122628731 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 0.03388672035275 bayes_pls_golite062009
substrate-specific transporter activity 0.0278206012367701 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle