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Protein Overview: lectin-29Ca-PA

General Information:
Name(s) found: lectin-29Ca-PA / FBpp0079320 [FlyBase]
Description(s) found:
Found 30 descriptions.
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  • The gene lectin-29Ca is referred to in FlyBase by the symbol Dmel\lectin-29Ca (CG17799, FBgn0040098). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:8393489..8394280. It has the cytological map location 29C1. Based on sequence similarity, it is predicted to have molecular function</span>: galactose binding. The biological processes in which it is involved are not known. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 236 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: binding [IEA]
    galactose binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYKYATCIFS IFALWNFWGV SAKKQDTSTG TNELPKAPMP YYTIENIDMH QQHWFTYNSL  60
   61 RQNGTLWRIG NMEQRLEMRL QSFQNQMETK LRALKQQIEP YMENVKMSNK IKMSVFKKIG 120
  121 SRHFYLEKQK KMPWDSAYDT CRQMGGHLAN ILDEKELNEI FSEETKKKYW VDINSRANDG 180
  181 ASWISTLSGR DVPFLKWKPN LATNIHNHCV YINSNEMYFE NCANDNYFAC QAEQWA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..236] PSI-BLAST 28.69897 Crystal Structure of a fragment of DC-SIGNR (containg the carbohydrate recognition domain and two repeats of the neck) complexed with Lewis-x.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • carbohydrate binding
    		•  2.5043603928753 bayes_pls_golite062009
  • pattern binding
    		•  1.70305894268927 bayes_pls_golite062009
  • polysaccharide binding
    		•  1.64288454942908 bayes_pls_golite062009
  • glycosaminoglycan binding
    		•  1.38067008278151 bayes_pls_golite062009
  • binding
    		•  1.28839159902614 bayes_pls_golite062009
  • receptor binding
    		•  1.12811568960851 bayes_pls_golite062009
  • sugar binding
    		•  0.968405226037797 bayes_pls_golite062009
  • protein binding
    		•  0.603261100926743 bayes_pls_golite062009
  • extracellular matrix structural constituent
    		•  0.30636688317721 bayes_pls_golite062009
  • receptor activity
    		•  0.172562676176019 bayes_pls_golite062009
  • growth factor activity
    		•  0.0253824551299395 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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