Protein Overview: gi|114644468

General Information:
Name(s) found:	gi\|114644468 [NCBI NR]
Description(s) found: Found 3 descriptions. SHOW ALL	gi\|114644468\|ref\|XP_522407.2\| PREDICTED: activating transcription factor 7 isoform 2 [Pan troglodytes] [NCBI NR]
Organism:	Pan troglodytes
Length:	494 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDDRPFVCN APGCGQRFTN EDHLAVHKHK HEMTLKFGPA RTDSVIIADQ TPTPTRFLKN  60
   61 CEEVGLFNEL ASSFEHEFKK AADEDEKKAR SRTVAKKLVA AAGPLDMSLP STPDIKIKEE 120
  121 EPVEVDSSPP DSPASSPCSP PLKEKEVTPK PVLISTPTPT IVRPGSLPLH LGYDPLHPTL 180
  181 PSPTSVITQA PPSNRQMGSP TGSLPLVMHL ANGQTMPVLP GPPVQMPSVI SLARPVSMVP 240
  241 NIPGIPGPPV NSSGSISPSG HPIPSEAKMR LKATLTHQVS SINGGCGMVV GTASTMVTAR 300
  301 PEQSQILIQH PDAPSPAQPQ VSPAQPTPST GGRRRRTVDE DPDERRQRFL ERNRAAASRC 360
  361 RQKRKLWVSS LEKKAEELTS QNIQLSNEVT LLRNEVAQLK QLLLAHKDCP VTALQKKTQG 420
  421 YLESPKESSE PTGSPAPVIQ HSSATAPSNG LSVRSAAEAV ATSVLTQMAS QRTELSMPIQ 480
  481 SHVIMTPQSQ SAGR

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..98]	FFAS03	1.06	Solution Structure of a Human C2H2-type Zinc Finger Protein
2	View Details	[99..238]	MSA	3.171996	View MSA. No confident structure predictions are available.
3	View Details	[239..334]	deduced	N/A	No confident structure predictions are available.
4	View Details	[335..408]	PSI-BLAST	14.221849	Structure Of The DNA Binding Domains Of IRF3, ATF-2 and Jun Bound To DNA
5	View Details	[409..494]	deduced	N/A	No confident structure predictions are available.

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
nucleic acid binding	2.5629554787463	bayes_pls_golite062009
binding	2.56065593409893	bayes_pls_golite062009
DNA binding	2.4518582111042	bayes_pls_golite062009
transcription regulator activity	2.37991313341667	bayes_pls_golite062009
transcription factor activity	1.5666937639803	bayes_pls_golite062009
protein binding	0.975412203442928	bayes_pls_golite062009
RNA polymerase II transcription factor activity	0.844177917146674	bayes_pls_golite062009
transcription activator activity	0.737716870305362	bayes_pls_golite062009
sequence-specific DNA binding	0.554760811774926	bayes_pls_golite062009
chromatin binding	0.429389462184423	bayes_pls_golite062009
catalytic activity	0.263007611601737	bayes_pls_golite062009
transcription repressor activity	0.219901277043559	bayes_pls_golite062009
specific RNA polymerase II transcription factor activity	0.0696202830076269	bayes_pls_golite062009
transcription factor binding	0.0236725821766979	bayes_pls_golite062009

2

No functions predicted.

3

No functions predicted.

4

No functions predicted.

5

No functions predicted.

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.82

Source: Reynolds et al. (2008)

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle