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Protein Overview: XPA_MOUSE

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..62] MSA 1.026992 View MSA. No confident structure predictions are available.
2 View Details [63..272] PSI-BLAST 45.69897 SOLUTION STRUCTURE OF THE DNA-AND RPA-BINDING DOMAIN OF THE HUMAN REPAIR FACTOR XPA, NMR, 1 STRUCTURE

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2
Term Confidence Notes
  • binding
  • 2.96409924710655 bayes_pls_golite062009
  • protein binding
  • 2.44501340584871 bayes_pls_golite062009
  • transcription regulator activity
  • 2.22839475692516 bayes_pls_golite062009
  • DNA binding
  • 2.18702281581791 bayes_pls_golite062009
  • nucleic acid binding
  • 2.04270847321412 bayes_pls_golite062009
  • transcription activator activity
  • 1.60639114794515 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 1.59705128803795 bayes_pls_golite062009
  • transcription factor activity
  • 1.44182975349714 bayes_pls_golite062009
  • structure-specific DNA binding
  • 0.610805977602876 bayes_pls_golite062009
  • ligand-dependent nuclear receptor activity
  • 0.55799224325565 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 0.51536225088963 bayes_pls_golite062009
  • transcription factor binding
  • 0.43597775400036 bayes_pls_golite062009
  • transcription coactivator activity
  • 0.42962641193703 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
  • 0.37925266318051 bayes_pls_golite062009
  • double-stranded DNA binding
  • 0.280685154942276 bayes_pls_golite062009
  • receptor activity
  • 0.230063209127305 bayes_pls_golite062009
  • catalytic activity
  • 0.101795606736461 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle