YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|19115748

General Information:
Name(s) found: gi|19115748 [NCBI NR]
Description(s) found:
  • gi|19115748|ref|NP_594836.1| mitochondrial type I [2Fe-2S] ferredoxin Etp1/ cytochrome oxidase cofactor Cox15, fusion [Schizosaccharomyces pombe] [NCBI NR]
    • Organism: Schizosaccharomyces pombe 972h-
    Length: 631 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNISRSSGLM RQFLLQPLRK GCDISCLGRS SWRMSRSFSG SSVLNEINLS RTKNLFLNDC  60
   61 KFNKNSFEKF FARRLSNSVA PTPGGILQET EKIPSKKVAF WLLGSSALVL AIVVVGGITR 120
  121 LTESGLSITE WKPITGVIPP LTDEQWNQEF ELYKKSPEFE KLNSHMTVDE FKNIFFWEWF 180
  181 HRVLGRGIGL TILLPSIYMI VTKRASPWLS KRLIGLTGLV GLQGVIGWWM VKSGLSEELF 240
  241 SDGSHPRVSH YRLATHLAAA VALYIGLVWT GHGILQRHAF LKSMKSGSTS QLTSMVSSVQ 300
  301 KMKGFRTSVN SFVGLVLITL LSGAFVAGLD AGMIYCTFPE MGEGRLAPSK SELFDQRFCR 360
  361 KDDKSDLIWR NMIDNPSLVQ LEHRILAITT FVAACGLFIF SRAKRNILPK KIKTSINVVT 420
  421 GVVTAQATLG IMTLIYVVPV PLAALHQAGS LVTLTAALSL AQRLHPEYAL KNIRSWTKLI 480
  481 SSPPKSSISS SILTQQRQFH TFRPSFHSEI KKPLPGTGIK VFFVTPEGRE IMIEGNEGDS 540
  541 ILDLAHANNI DLEGACEGSV ACSTCHVIVD PEHYELLDPP EEDEEDMLDL AFGLEETSRL 600
  601 GCQVLLRKDL DGIRVRIPAQ TRNIRLERPK A

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..93] deduced N/A No confident structure predictions are available.
    2 View Details [94..260] MSA 5.222996 View MSA. No confident structure predictions are available.
    3 View Details [261..477] MSA 3.444995 View MSA. No confident structure predictions are available.
    4 View Details [478..631] PSI-BLAST 27.30103 Adrenodoxin-like ferredoxin

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4
    Term Confidence Notes
  • electron carrier activity
    		•  5.46307392364196 bayes_pls_golite062009
  • oxidoreductase activity
    		•  5.29161103487613 bayes_pls_golite062009
  • NADH dehydrogenase activity
    		•  4.24327638063454 bayes_pls_golite062009
  • NADH dehydrogenase (quinone) activity
    		•  4.15859537745252 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH
    		•  3.78210410787032 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor
    		•  3.67682177056786 bayes_pls_golite062009
  • succinate dehydrogenase activity
    		•  3.27019699125535 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-CH group of donors
    		•  2.73204059194206 bayes_pls_golite062009
  • binding
    		•  1.24006712894981 bayes_pls_golite062009
  • iron-sulfur cluster binding
    		•  0.37907856540545 bayes_pls_golite062009
  • metal cluster binding
    		•  0.37907856540545 bayes_pls_golite062009
  • protein binding
    		•  0.200129038442128 bayes_pls_golite062009
  • catalytic activity
    		•  0.105119876745552 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle