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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|19115748
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNISRSSGLM RQFLLQPLRK GCDISCLGRS SWRMSRSFSG SSVLNEINLS RTKNLFLNDC  60
   61 KFNKNSFEKF FARRLSNSVA PTPGGILQET EKIPSKKVAF WLLGSSALVL AIVVVGGITR 120
  121 LTESGLSITE WKPITGVIPP LTDEQWNQEF ELYKKSPEFE KLNSHMTVDE FKNIFFWEWF 180
  181 HRVLGRGIGL TILLPSIYMI VTKRASPWLS KRLIGLTGLV GLQGVIGWWM VKSGLSEELF 240
  241 SDGSHPRVSH YRLATHLAAA VALYIGLVWT GHGILQRHAF LKSMKSGSTS QLTSMVSSVQ 300
  301 KMKGFRTSVN SFVGLVLITL LSGAFVAGLD AGMIYCTFPE MGEGRLAPSK SELFDQRFCR 360
  361 KDDKSDLIWR NMIDNPSLVQ LEHRILAITT FVAACGLFIF SRAKRNILPK KIKTSINVVT 420
  421 GVVTAQATLG IMTLIYVVPV PLAALHQAGS LVTLTAALSL AQRLHPEYAL KNIRSWTKLI 480
  481 SSPPKSSISS SILTQQRQFH TFRPSFHSEI KKPLPGTGIK VFFVTPEGRE IMIEGNEGDS 540
  541 ILDLAHANNI DLEGACEGSV ACSTCHVIVD PEHYELLDPP EEDEEDMLDL AFGLEETSRL 600
  601 GCQVLLRKDL DGIRVRIPAQ TRNIRLERPK A

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle