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Protein Overview: YAR1

General Information:
Name(s) found: YAR1 / YPL239W [SGD]
Description(s) found:
Found 31 descriptions.
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  • Cytoplasmic ankyrin-repeat containing protein of unknown function, proposed to link the processes of 40S ribosomal subunit biogenesis and adaptation to osmotic and oxidative stress; expression repressed by heat shock [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 200 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    Biological Process: response to oxidative stress [IMPLink to PubMed article]
    ribosomal small subunit biogenesis [IGILink to PubMed article][IMPLink to PubMed article]
    response to osmotic stress [IMPLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLHSEPLDQ EDQDTIILDA RAGDLDSLKD IFTTLVSPEL LSTCKESESD STALHMAAAN  60
   61 GHIETVRYIL ETVSRANSAE DLKAFVNEVN KTGNTALHWA SLNGKLDVVK LLCDEYEADP 120
  121 FIRNKFGHDA IFEAENSGKE EVETYFLKKY DVEPEDDEED TQTEGKNSVQ ITKGTEIEQV 180
  181 TKEATEALRE ETEKLNINKD

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Riffle et al. (2010) (Unpublished Data) RPS3 YAR1
    View Details Krogan NJ, et al. (2006) ENP1 LTV1 LYS9 YAR1

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data YAR1 Huh WK, et al. (2003)

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..121] PSI-BLAST 119.30103 4ank
    2 View Details [122..200] PSI-BLAST 119.30103 4ank


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle