| General Information: |
|
| Name(s) found: |
SMC5 /
YOL034W
[SGD]
|
| Description(s) found:
Found 24 descriptions. SHOW ALL |
|
| Organism: | Saccharomyces cerevisiae |
| Length: | 1093 amino acids |
Gene Ontology: |
|
| Cellular Component: |
nucleus
[IDA ]
Smc5-Smc6 complex [IPI ]
|
| Biological Process: |
cell proliferation
[IDA]
DNA repair [IDA ][IMP]
|
| Molecular Function: |
molecular_function
[ND]
|
| Sequence: |
|
| Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51
| | | | | |
1 MTSLIDLGRY VERTHHGEDT EPRSKRVKIA KPDLSSFQPG SIIKIRLQDF VTYTLTEFNL 60
61 SPSLNMIIGP NGSGKSTFVC AVCLGLAGKP EYIGRSKKVE DFIKNGQDVS KIEITLKNSP 120
121 NVTDIEYIDA RDETIKITRI ITRSKRRSDY LINDYQVSES VVKTLVAQLN IQLDNLCQFL 180
181 SQERVEEFAR LKSVKLLVET IRSIDASLLD VLDELRELQG NEQSLQKDLD FKKAKIVHLR 240
241 QESDKLRKSV ESLRDFQNKK GEIELHSQLL PYVKVKDHKE KLNIYKEEYE RAKANLRAIL 300
301 KDKKPFANTK KTLENQVEEL TEKCSLKTDE FLKAKEKINE IFEKLNTIRD EVIKKKNQNE 360
361 YYRGRTKKLQ ATIISTKEDF LRSQEILAQT HLPEKSVFED IDIKRKEIIN KEGEIRDLIS 420
421 EIDAKANAIN HEMRSIQRQA ESKTKSLTTT DKIGILNQDQ DLKEVRDAVL MVREHPEMKD 480
481 KILEPPIMTV SAINAQFAAY LAQCVDYNTS KALTVVDSDS YKLFANPILD KFKVNLRELS 540
541 SADTTPPVPA ETVRDLGFEG YLSDFITGDK RVMKMLCQTS KIHTIPVSRR ELTPAQIKKL 600
601 ITPRPNGKIL FKRIIHGNRL VDIKQSAYGS KQVFPTDVSI KQTNFYQGSI MSNEQKIRIE 660
661 NEIINLKNEY NDRKSTLDAL SNQKSGYRHE LSELASKNDD INREAHQLNE IRKKYTMRKS 720
721 TIETLREKLD QLKREARKDV SQKIKDIDDQ IQQLLLKQRH LLSKMASSMK SLKNCQKELI 780
781 STQILQFEAQ NMDVSMNDVI GFFNEREADL KSQYEDKKKF VKEMRDTPEF QSWMREIRSY 840
841 DQDTKEKLNK VAEKYEEEGN FNLSFVQDVL DKLESEIAMV NHDESAVTIL DQVTAELREL 900
901 EHTVPQQSKD LETIKAKLKE DHAVLEPKLD DIVSKISARF ARLFNNVGSA GAVRLEKPKD 960
961 YAEWKIEIMV KFRDNAPLKK LDSHTQSGGE RAVSTVLYMI ALQEFTSAPF RVVDEINQGM1020
1021 DSRNERIVHK AMVENACAEN TSQYFLITPK LLTGLHYHEK MRIHCVMAGS WIPNPSEDPK1080
1081 MIHFGETSNY SFD |
| PUBLICATION | TOPOLOGY | COCOMPLEXED PROTEINS | |
| View Details | Hazbun TR, et al. (2003) |
|
KRE29 MMS21 NSE1 NSE3 NSE4 NSE5 SMC5 SMC6 |
| View Details | Krogan NJ, et al. (2006) |
|
GDH2 MMS21 NSE3 NSE4 SMC5 YOR352W |
| View Details | Qiu et al. (2008) |
|
NSE1 SMC5 SMC6 |
The following runs contain data for this protein:
| BAIT | COMMENTS | PUBLICATION | |
| View Run | No Comments | Hazbun TR, et al. (2003) | |
| View Run | No Comments | Hazbun TR, et al. (2003) | |
| View Run | No Comments | Hazbun TR, et al. (2003) | |
| View Run | No Comments | Hazbun TR, et al. (2003) | |
| View Run | No Comments | Hazbun TR, et al. (2003) | |
| View Run | No Comments | Hazbun TR, et al. (2003) | |
| View Run | No Comments | Hazbun TR, et al. (2003) |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
| BAIT | PREY | HITS | PUBLICATION | |
| View Screen | 2 | Hazbun TR, et al. (2003) | ||
| View Screen | 2 | Hazbun TR, et al. (2003) |
New Feature: Upload Your Own Microscopy Data
| PROTEIN(S) | PUBLICATION | |
| View Data |
|
Unpublished Data |
| View Data |
|
Unpublished Data |
| View Data |
|
Unpublished Data |
| View Data |
|
Huh WK, et al. (2003) |
Domains predicted:
| # | Region(s) | Method | Confidence | Match Description | |
| 1 | View Details | [1..126] |  |
8.0 | Rad50 |
| 2 | View Details | [127..283] | |
23.69897 | Heavy meromyosin subfragment |
| 3 | View Details | [284..300] [372..404] |
|
2.154902 | Colicin Ia; Colicin Ia, N-terminal domain |
| 4 | View Details | [301..371] [405..435] |
|
2.154902 | Colicin Ia; Colicin Ia, N-terminal domain |
| 5 | View Details | [436..713] | |
2.154902 | Colicin Ia; Colicin Ia, N-terminal domain |
| 6 | View Details | [714..903] | |
8.522879 | Tropomyosin |
| 7 | View Details | [904..1093] | |
25.522879 | Smc head domain |
| Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
| Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)