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Protein Overview: YIL161W

General Information:
Name(s) found: YIL161W [SGD]
Description(s) found:
Found 22 descriptions.
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  • Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; mRNA is enriched in Scp160p-associated mRNPs; YIL161W is a non-essential gene [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 235 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTKLSVTGA KKSQGKASGL GNEGTPIGNE ESTNKAKNGN KKRNKNRNRN KKTETKEQNE  60
   61 PKPVTGGEEV RVEKSQAKNR RRKNNNGANK KNTLHYSKEI NVEERKQIAK RQEEIEQCIH 120
  121 TLSDFKLFKK GKHVTSYGYR ISPMTDSGKI SLKILFNIPL DYPKAPIKLT MKSNEEVSSY 180
  181 MDTVIANFNW KARQLVKEDW RILSQINYLV SELEILKMEN YKQIDKLRNS FYKTI

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Riffle et al. (2010) (Unpublished Data) FAP1 YIL161W
    View Details Krogan NJ, et al. (2006) FAP1 FPR1 MRP2 YIL161W
    View Details Gavin AC, et al. (2006) FAP1 YIL161W

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data YIL161W Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..235] deduced N/A No confident structure predictions are available.
    2 View Details [91..235] FFAS03 0.985 No description for 2dawA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • ligase activity
    		•  0.294062272819917 bayes_pls_golite062009
  • small conjugating protein ligase activity
    		•  0.246234308373384 bayes_pls_golite062009
  • catalytic activity
    		•  0.0775376812710222 bayes_pls_golite062009


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle