Protein Overview: CPD1

General Information:
Name(s) found:	CPD1 / YGR247W [SGD]
Description(s) found: Found 29 descriptions. SHOW ALL	Cyclic nucleotide phosphodiesterase, hydrolyzes ADP-ribose 1'', 2''-cyclic phosphate to ADP-ribose 1''-phosphate; may have a role in tRNA splicing; no detectable phenotype is conferred by null mutation or by overexpression [SGD]
Organism:	Saccharomyces cerevisiae
Length:	239 amino acids
Gene Ontology:
Cellular Component:	clathrin-coated vesicle [IDA]
Biological Process:	DNA metabolic process [IGI] meiosis [IEP]
Molecular Function:	2',3'-cyclic-nucleotide 3'-phosphodiesterase activity [IDA][IMP]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIALWYCPP QGSVAYETLQ MLIFSFQTLF PDSPVFEPHV TVTSHLVCNS KDDVNKILTS  60
   61 CVAAIQSIRS HQTAKKGRKG QVSHAVAAPL VSFNGCSVGK QYFKKIVLEC NKNKILYGVA 120
  121 QVMREMYVEI DPETRSSRAA TWVHEEFHPH VSLLYSDIHP VSQASLRVVQ QRIEDALDVQ 180
  181 LVPREKRKGS GNADGSNEVQ MRWDFDVSSS LSWNIPGTFK VVNCVGPVQE WEVLGRVDV

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

	BAIT	PREY	HITS	PUBLICATION
View Screen	CPD1	MTF2	2	Unpublished Fields Lab Data
View Screen	CPD1	IKI3	2	Unpublished Fields Lab Data

Microscopy / Localization Data

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	PROTEIN(S)	PUBLICATION
View Data	CPD1	Huh WK, et al. (2003)
View Data	CPD1 and CHC1	Huh WK, et al. (2003)

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..239]	deduced	N/A	No confident structure predictions are available.

Functions predicted (by domain):

Gene Ontology predictions

Term	Confidence	Notes
cyclic-nucleotide phosphodiesterase activity	0.943836585803615	bayes_pls_golite062009
catalytic activity	0.853948963582441	bayes_pls_golite062009
binding	0.765852801454389	bayes_pls_golite062009
phosphoric diester hydrolase activity	0.72614328951284	bayes_pls_golite062009

Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.96

Source: Reynolds et al. (2008)

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2