General Information: |
|
Name(s) found: |
TIP20 /
YGL145W
[SGD]
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Description(s) found:
SHOW ONLY BEST |
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Organism: | Saccharomyces cerevisiae |
Length: | 701 amino acids |
Gene Ontology: |
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Cellular Component: |
endoplasmic reticulum
[IDA]
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Biological Process: |
retrograde vesicle-mediated transport, Golgi to ER
[IGI]
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Molecular Function: |
molecular_function
[ND]
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Sequence: |
|
Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MNGIDDLLNI NDRIKQVQNE RNELASKLQN LKQSLASNDT EVALSEVIAQ DIIEVGASVE 60 61 GLEQLRAKYG DLQILNKLEK VAVQQTQMQA GVDKLDSFER QLDELAEQPP DQFTLDDVKA 120 121 LHSKLTSVFA TVPQINNIDS QYAAYNKLKS KVTGKYNDVI IQRLATNWSN TFDQKLLEAQ 180 181 WDTQKFASTS VGLVKCLREN STKLYQLSLL YLPLEEETQN GDSERPLSRS NNNQEPVLWN 240 241 FKSLANNFNV RFTYHFHATS SSSKIETYFQ FLNDYLAENL YKCINIFHDD CNGLTKPVIH 300 301 EQFINYVLQP IRDKVRSTLF QNDLKTLIVL ISQILATDKN LLNSFHYHGL GLVSLISDEV 360 361 WEKWINYEVE MANRQFINIT KNPEDFPKSS QNFVKLINKI YDYLEPFYDL DFDLLVRYKL 420 421 MTCSLIFMNL TSSYLDYILT VDSLNETRTK EQELYQTMAK LQHVNFVYRK IKSLSSNFIF 480 481 IQLTDIVNST ESKKYNSLFQ NVENDYEKAM STDMQNSIVH RIQKLLKETL RNYFKISTWS 540 541 TLEMSVDENI GPSSVPSAEL VNSINVLRRL INKLDSMDIP LAISLKVKNE LLNVIVNYFT 600 601 ESILKLNKFN QNGLNQFLHD FKSLSSILSL PSHATNYKCM SLHELVKILK LKYDPNNQQF 660 661 LNPEYIKTGN FTSLKEAYSI KYLKDTKIQD ALYRIIYGNI L |
  | PUBLICATION | TOPOLOGY | COCOMPLEXED PROTEINS |
View Details | Riffle et al. (2010) (Unpublished Data) | DSL1 SEC39 TIP20 UFE1 USE1 YKT6 | |
View Details | Gavin AC, et al. (2006) | DSL1 SEC39 TIP20 UFE1 USE1 |
The following runs contain data for this protein:
  | BAIT | COMMENTS | PUBLICATION |
View Run | Sample boi 1 with ha tag from october 2005 | McCusker D, et al (2007) | |
View Run | #20 Asynchronous Prep1-TiO2 Phosphopeptide enrichment, PartB | Keck JM, et al. (2011) |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
New Feature: Upload Your Own Microscopy Data
  | PROTEIN(S) | PUBLICATION |
View Data |
|
Huh WK, et al. (2003) |
Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..164] [190..246] |
7.53 | CBP80, 80KDa nuclear cap-binding protein | |
2 | View Details | [165..189] [247..339] |
7.53 | CBP80, 80KDa nuclear cap-binding protein | |
3 | View Details | [340..432] | 7.53 | CBP80, 80KDa nuclear cap-binding protein | |
4 | View Details | [433..630] | 7.53 | CBP80, 80KDa nuclear cap-binding protein | |
5 | View Details | [631..701] | N/A | No confident structure predictions are available. |
Functions predicted (by domain):
# | Gene Ontology predictions | |||||||||||||||||||||||||||
1 |
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2 | No functions predicted. | |||||||||||||||||||||||||||
3 | No functions predicted. | |||||||||||||||||||||||||||
4 | No functions predicted. | |||||||||||||||||||||||||||
5 | No functions predicted. |
Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)