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Protein Overview: TIP20

Protein Complex Data

  PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
View Details Riffle et al. (2010) (Unpublished Data) DSL1 SEC39 TIP20 UFE1 USE1 YKT6
View Details Gavin AC, et al. (2006) DSL1 SEC39 TIP20 UFE1 USE1

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run BOI1 Sample boi 1 with ha tag from october 2005 McCusker D, et al (2007)
View Run MLP2 #20 Asynchronous Prep1-TiO2 Phosphopeptide enrichment, PartB Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data TIP20 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..164]
[190..246]
ORFEUS 7.53 CBP80, 80KDa nuclear cap-binding protein
2 View Details [165..189]
[247..339]
ORFEUS 7.53 CBP80, 80KDa nuclear cap-binding protein
3 View Details [340..432] ORFEUS 7.53 CBP80, 80KDa nuclear cap-binding protein
4 View Details [433..630] ORFEUS 7.53 CBP80, 80KDa nuclear cap-binding protein
5 View Details [631..701] deduced N/A No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • protein binding
  • 2.22504663904848 bayes_pls_golite062009
  • binding
  • 2.04447608076272 bayes_pls_golite062009
  • cytoskeletal protein binding
  • 1.88229294781644 bayes_pls_golite062009
  • actin binding
  • 0.92731255372235 bayes_pls_golite062009
  • actin filament binding
  • 0.847123006562293 bayes_pls_golite062009
  • SNARE binding
  • 0.309596137075689 bayes_pls_golite062009
  • syntaxin binding
  • 0.214277649172074 bayes_pls_golite062009
  • protein complex binding
  • 0.0466251755500114 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle