General Information: |
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Name(s) found: |
DCL4_ARATH
[Swiss-Prot]
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Description(s) found:
Found 4 descriptions. SHOW ALL |
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Organism: | Arabidopsis thaliana |
Length: | 1589 amino acids |
Gene Ontology: |
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Cellular Component: |
nucleus
[IDA]
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Biological Process: |
virus induced gene silencing
[IGI]
[NOT]production of miRNAs involved in gene silencing by miRNA [IGI] vegetative phase change [IMP] defense response to virus [IMP] production of lsiRNA involved in RNA interference [IMP] RNA processing [ISS] maintenance of DNA methylation [IMP] production of siRNA involved in RNA interference [IMP] production of ta-siRNAs involved in RNA interference [IMP] |
Molecular Function: |
RNA binding
[ISS]
ribonuclease III activity [ISS] protein binding [IPI] |
Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MRDEVDLSLT IPSKLLGKRD REQKNCEEEK NKNKKAKKQQ KDPILLHTSA ATHKFLPPPL 60 61 TMPYSEIGDD LRSLDFDHAD VSSDLHLTSS SSVSSFSSSS SSLFSAAGTD DPSPKMEKDP 120 121 RKIARRYQVE LCKKATEENV IVYLGTGCGK THIAVMLIYE LGHLVLSPKK SVCIFLAPTV 180 181 ALVEQQAKVI ADSVNFKVAI HCGGKRIVKS HSEWEREIAA NEVLVMTPQI LLHNLQHCFI 240 241 KMECISLLIF DECHHAQQQS NHPYAEIMKV FYKSESLQRP RIFGMTASPV VGKDGPPLDS 300 301 FTYFSGSFQS ENLSKSINSL ENLLNAKVYS VESNVQLDGF VSSPLVKVYY YRSALSDASQ 360 361 STIRYENMLE DIKQRRANVY CLRFLEAAKI QLNSDHNVQD EPVGKNPKSK ICDTYLSMAA 420 421 EALSSGVAKD ENASDLLSLA ALKEPLFSRK LVQLIKILSV FRLEPHMKCI IFVNRIVTAR 480 481 TLSCILNNLE LLRSWKSDFL VGLSSGLKSM SRRSMETILK RFQSKELNLL VATKVGEEGL 540 541 DIQTCCLVIR YDLPETVTSF IQSRGRARMP QSEYAFLVDS GNEKEMDLIE NFKVNEDRMN 600 601 LEITYRSSEE TCPRLDEELY KVHETGACIS GGSSISLLYK YCSRLPHDEF FQPKPEFQFK 660 661 PVDEFGGTIC RITLPANAPI SEIESSLLPS TEAAKKDACL KAVHELHNLG VLNDFLLPDS 720 721 KDEIEDELSD DEFDFDNIKG EGCSRGDLYE MRVPVLFKQK WDPSTSCVNL HSYYIMFVPH 780 781 PADRIYKKFG FFMKSPLPVE AETMDIDLHL AHQRSVSVKI FPSGVTEFDN DEIRLAELFQ 840 841 EIALKVLFER GELIPDFVPL ELQDSSRTSK STFYLLLPLC LHDGESVISV DWVTIRNCLS 900 901 SPIFKTPSVL VEDIFPPSGS HLKLANGCWN IDDVKNSLVF TTYSKQFYFV ADICHGRNGF 960 961 SPVKESSTKS HVESIYKLTE PQELDEYFIE IPPELSHLKI KGLSKDIGSS LSLLPSIMHR1020 1021 MENLLVAIEL KHVLSASIPE IAEVSGHRVL EALTTEKCHE RLSLERLEVL GDAFLKFAVS1080 1081 RHLFLHHDSL DEGELTRRRS NVYIRDQALD PTQFFAFGHP CRVTCDEVAS KEVHSLNRDL1140 1141 GILESNTGEI RCSKGHHWLY KKTIADVVEA LVGAFLVDSG FKGAVKFLKW IGVNVDFESL1200 1201 QVQDACIASR RYLPLTTRNN LETLENQLDY KFLHKGLLVQ AFIHPSYNRH GGGCYQRLEF1260 1261 LGDAVLDYLM TSYFFTVFPK LKPGQLTDLR SLSVNNEALA NVAVSFSLKR FLFCESIYLH1320 1321 EVIEDYTNFL ASSPLASGQS EGPRCPKISP IKELIELCQS YKWDREISAT KKDGAFTVEL1380 1381 KVTKNGCCLT VSATGRNKRE GTKKAAQLMI TNLKAHENIT TSHPLEDVLK NGIRNEAKLI1440 1441 GYNEDPIDVV DLVGLDVENL NILETFGGNS ERSSSYVIRR GLPQAPSKTE DRLPQKAIIK1500 1501 AGGPSSKTAK SLLHETCVAN CWKPPHFECC EEEGPGHLKS FVYKVILEVE DAPNMTLECY1560 1561 GEARATKKGA AEHAAQAAIW CLKHSGFLC |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
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Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)