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Protein Overview: CE39252

General Information:
Name(s) found: CE39252 [WormBase]
Description(s) found:
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  • WBGene00009686 locus:ent-4 status:Confirmed UniProt:Q20396 protein_id:CAA92605.3 [WormBase]
  • gi|82465140|emb|CAA92605.3| C. elegans protein F44D12.9, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|115534410|ref|NP_501807.3| hypothetical protein F44D12.9 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep130-phg-ecoli-orf-rand.fasta]
  • CE39252 WBGene00009686 status:Partially_confirmed UniProt:Q20396_CAEEL protein_id:CAA92605.3 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE39252 WBGene00009686 status:Partially_confirmed UniProt:Q20396_CAEEL protein_id:CAA92605.3| [wormORF-contam.fasta]
  • [wormORF-contam.fasta]
  • CE39252 WBGene00009686 status:Partially_confirmed TR:Q20396 protein_id:CAA92605.3 [wormpep160-contam.fasta]
  • Hypothetical protein F44D12.9 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • F44D12.9 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE39252 WBGene00009686 status:Partially_confirmed UniProt:Q20396 protein_id:CAA92605.3 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • CE39252 WBGene00009686 status:Confirmed UniProt:Q20396 protein_id:CAA92605.3 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE39252 WBGene00009686 locus:ent-4 status:Confirmed UniProt:Q20396 protein_id:CAA92605.3 [wormbase_c_elegans_ws234_and_mcherry_10-06-2012_reversed.fasta]
  • CE39252 WBGene00009686 locus:ent-7 status:Confirmed UniProt:Q20396 protein_id:CAA92605.3 [wormpep246-ecoli-contam.fasta]
  • Isoform of E1B6S1, Equilibrative Nucleoside Transporter OS=Caenorhabditis elegans GN=ent-7 PE=4 SV=3 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 449 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    Biological Process: transport [IEALink to PubMed article]
    Molecular Function: nucleoside transmembrane transporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNEELAENSS VTGNSQIGLV TPRDTWGRKE SSPTDRWYLV YIIFTMHGMG MLMSWNMFIT  60
   61 IAPQYYHDYW FNNTNYQDSF MSIIGVTSQI PNVGIMILNT IVVMVGFMML RVVVPLIVNC 120
  121 ILIGVIVILA IFVTPSPDSV TWFYIVTLII IMAMNLANGI YQNSVYGIVA DFPDNYINSL 180
  181 VIGNNLCGVF TSVLSILTIL ISPNDIELNA LLYFSISLAF MIVCLFSLYF LVRLPFYQYY 240
  241 MAKGVEARAE EKVDNPSIRQ YWECFRMCWV QLFNNFYVYF VSLLIFPAMM TDSVYSDPTN 300
  301 GITSVFGDSL FFPITTFLNF NLFAWIGSSL ANYVQFPSEK YLWIGVALRT VFIPFYLFCN 360
  361 YRPDTRRWPV WFKNEWWFTI GCTIMAFTCG YMSSLALIYT PSKVPARYQK LSGMLASIFL 420
  421 MLGILIGVAS TPIAAWAVDS IGSRKNMTV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..449] PSI-BLAST 36.221849 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transporter activity
    		•  4.09176719149278 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.59744164024479 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.5865018981083 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  3.54194478414824 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.21266150105753 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  1.79369588808394 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.59419818573076 bayes_pls_golite062009
  • binding
    		•  1.45862166005114 bayes_pls_golite062009
  • secondary active transmembrane transporter activity
    		•  1.22264637452409 bayes_pls_golite062009
  • polyol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • alcohol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • glycerol transmembrane transporter activity
    		•  0.812001619402678 bayes_pls_golite062009
  • symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • solute:cation symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • sugar:hydrogen symporter activity
    		•  0.143419068761182 bayes_pls_golite062009
  • cation:sugar symporter activity
    		•  0.143419068761182 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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