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Protein Overview: gi|12723803, gi|...

General Information:
Name(s) found: gi|15672856 [NCBI NR]
gi|12723803 [NCBI NR]
Description(s) found:
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  • gi|15672856|ref|NP_267030.1| 50S ribosomal protein L19 [Lactococcus lactis subsp. lactis Il1403] [NCBI NR]
  • gi|12723803|gb|AAK04972.1|AE006321_10 50S ribosomal protein L19 [Lactococcus lactis subsp. lactis Il1403] [NCBI NR]
  • 50S ribosomal protein L19 [Lactococcus lactis subsp. lactis Il1403]gi|12723803|gb|AAK04972.1| 50S ribosomal protein L19 [Lactococcus lactis subsp. lactis Il1403]gi|25295321|pir||B86734 50S ribosomal protein L19 [imported] - Lactococcus lactis subsp. lac [nrdb_11152004_Chlamydomonas]
  • 50S ribosomal protein L19 [Lactococcus lactis subsp. lactis Il1403] [nr-271106-contam.fasta]
    • Organism: Lactococcus lactis subsp. lactis Il1403
    Length: 125 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLNDGQEEK KMNLIESINA AQLRTDIPDF RPGDTVRVHA KVVEGTRERI QMFEGVVIAR  60
   61 KNSGINETYT VRKISNGVGV ERIFPVHTPR VEQIEVIRHG KVRRAKLYYL RALTGKKARI 120
  121 AERRR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..125] PSI-BLAST 42.39794 No description for 1vs6P was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural constituent of ribosome
    		•  9.75663213016935 bayes_pls_golite062009
  • structural molecule activity
    		•  9.17485893013108 bayes_pls_golite062009
  • RNA binding
    		•  1.4457902513736 bayes_pls_golite062009
  • binding
    		•  1.06497983674709 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.694156012779703 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.531244221462633 bayes_pls_golite062009
  • protein binding
    		•  0.403456843184132 bayes_pls_golite062009
  • translation regulator activity
    		•  0.20179424040045 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
    		•  0.177099375659271 bayes_pls_golite062009
  • DNA binding
    		•  0.119656223173058 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle