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Protein Overview: RPOZ_ACIAD

General Information:
Name(s) found: RPOZ_ACIAD [Swiss-Prot]
Description(s) found:
Found 7 descriptions.
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  • DNA-directed RNA polymerase subunit omega OS=Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) GN=rpoZ PE=3 SV=1 [Swiss-Prot]
    • Organism: Acinetobacter sp. ADP1
    Length: 93 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARVTVEDCL DHVDNRFELV LVASKRARQL ARQGIEPTVE WDNDKPTVVS LREIAEGHVT  60
   61 KDILKQRDQD YQTSSLDLAL SANSLNLEGF SFQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..93] PSI-BLAST 4.69897 RNA polymerase omega subunit

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • DNA-directed RNA polymerase activity
    		•  1.41093990648225 bayes_pls_golite062009
  • RNA polymerase activity
    		•  1.41093990648225 bayes_pls_golite062009
  • catalytic activity
    		•  1.27293510281823 bayes_pls_golite062009
  • binding
    		•  1.12059328457873 bayes_pls_golite062009
  • nucleotidyltransferase activity
    		•  0.33965728293148 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.294415934234506 bayes_pls_golite062009
  • DNA binding
    		•  0.293598982151087 bayes_pls_golite062009
  • transferase activity
    		•  0.0854008431023199 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle