YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|30253566, gi|...

General Information:
Name(s) found: gi|30260245 [NCBI NR]
gi|30253566 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|30260245|ref|NP_842622.1| stage V sporulation protein T [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30253566|gb|AAP24108.1| stage V sporulation protein T [Bacillus anthracis str. Ames] [NCBI NR]
    • Organism: Bacillus anthracis str. Ames
    Length: 178 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: asexual sporulation [ISSLink to PubMed article]
    regulation of transcription, DNA-dependent [ISSLink to PubMed article]
    Molecular Function: transcription regulator activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKATGIVRRI DDLGRVVIPK EIRRTLRIRE GDPLEIFVDR DGEVILKKYS PISELGDFAK  60
   61 EYAEALYDSL GHNVLVCDRD SIIAVSGVSK KEYLNKSVGD LIEKTMEERK SVIMTDESDV 120
  121 SIIDGVTEKV HSYTVGPIVA NGDPIGAVII FSKEAIISEI EHKAVNTAAS FLAKQMEQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..41] PSI-BLAST 18.0 The solution structure of the N-domain of the transcription factor abrB
    2 View Details [42..178] FFAS03 1.58 Crystal structure of an hypothetical protein

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transcription regulator activity
    		•  1.99822727516605 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.895355083826725 bayes_pls_golite062009
  • DNA binding
    		•  0.804725539181502 bayes_pls_golite062009
  • binding
    		•  0.55634251837907 bayes_pls_golite062009
  • transcription factor activity
    		•  0.538957753898077 bayes_pls_golite062009
    2
    Term Confidence Notes
  • transcription regulator activity
    		•  2.6091868632927 bayes_pls_golite062009
  • DNA binding
    		•  1.95399184800417 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.92002739943412 bayes_pls_golite062009
  • transcription factor activity
    		•  1.78320411605201 bayes_pls_golite062009
  • binding
    		•  1.25785149934866 bayes_pls_golite062009
  • catalytic activity
    		•  0.366016769454956 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle