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Protein Overview: gi|39982605, gi|...

General Information:
Name(s) found: gi|39995841 [NCBI NR]
gi|39982605 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|39995841|ref|NP_951792.1| PTS system fructose subfamily IIA subunit [Geobacter sulfurreducens PCA] [NCBI NR]
  • gi|39982605|gb|AAR34065.1| PTS system IIA component, fructose subfamily [Geobacter sulfurreducens PCA] [NCBI NR]
    • Organism: Geobacter sulfurreducens PCA
    Length: 225 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: phosphoenolpyruvate-dependent sugar phosphotransferase system [ISSLink to PubMed article]
    Molecular Function: protein-N(PI)-phosphohistidine-sugar phosphotransferase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLNAAEAAR LLSTDEKTVK RWIRRDGLPA TPVDGEPRIN RIDLLEWATE RGIKVLPEAY  60
   61 AGAGDEPGLF PSLSSALQAG GIHCNVPGDD KLTVLRNVVD LLPLPQQVDP EFVLQVLLAR 120
  121 EALGTTAIGD GIAIPHMRNP ILLHVAGSSI TLCHLATPVD FGALDGKPVQ ILFTLTSPTV 180
  181 KAHLHLLSRL AHALRDPRLR EALKRPCDPA GILAAVAEIE RSLGG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..68] FFAS03 2.09 Terminase gpNU1 subunit domain
    2 View Details [69..225] PSI-BLAST 32.045757 Phosphotransferase IIa-mannitol

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transcription regulator activity
    		•  1.3695638465841 bayes_pls_golite062009
  • binding
    		•  1.25832675558318 bayes_pls_golite062009
  • DNA binding
    		•  0.248046419970394 bayes_pls_golite062009
  • transcription factor activity
    		•  0.142555021912665 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.118048144195768 bayes_pls_golite062009
    2
    Term Confidence Notes
  • protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
    		•  4.89047341597444 bayes_pls_golite062009
  • carbohydrate transmembrane transporter activity
    		•  3.92377913213665 bayes_pls_golite062009
  • transporter activity
    		•  2.16741930408232 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  2.05879816720019 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.87457143976439 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  1.82451780056478 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  1.7251575499811 bayes_pls_golite062009
  • binding
    		•  0.396676636991646 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  0.19707628828681 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.12881601139602 bayes_pls_golite062009
  • anion transmembrane transporter activity
    		•  0.10209580008722 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.85

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle