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Protein Overview: gi|24374828, gi|...

General Information:
Name(s) found: gi|24374828 [NCBI NR]
gi|24349517 [NCBI NR]
Description(s) found:
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  • gi|24374828|ref|NP_718871.1| 5'-nucleotidase, putative [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24349517|gb|AAN56315.1|AE015770_1 5'-nucleotidase, putative [Shewanella oneidensis MR-1] [NCBI NR]
  • 5'-nucleotidase, putative [Shewanella oneidensis MR-1]gi|24349517|gb|AAN56315.1| 5'-nucleotidase, putative [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas]
  • 5'-nucleotidase, putative [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 583 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: nucleobase, nucleoside and nucleotide interconversion [ISSLink to PubMed article]
    Molecular Function: 5'-nucleotidase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQRYSLSLA HINDTHSNFE PSRVHFSLNL GLKSFDITSH SGGYARLGYH ISKAREQADQ  60
   61 SNTPFLFLHG GDSFQGTLYF SHFKGKANAH LLNLLAPDAM VIGNHDIDEG NARLAEFAKQ 120
  121 IDFPLLAGNM DLSQEDIRKP GNLRTVANIL AYDEKTQLAS YLEKPFYDKK LAVIGITLDQ 180
  181 MKDIARPDPD THFVDAIATT ARTVEHLHAK GIKHIIVLSH LGLDQDKRLA EQVDGISLIV 240
  241 GGHTHTLQGD FTALGLSHLP YGEMVNGTPI VHAGKYAETL GLAEVEFDAA GRTIRLSGGN 300
  301 YFMLDKQFIL SSSEQVDDTD YQAVRQRFDA HPFILGDEAD EDIHDIIHDI YRPAIAEMEN 360
  361 KILALVPKNL VHTRLPSKTL PHGSEIAPWV SRSMFQEARI EDPRIHFALH NAGGVRQSVA 420
  421 QGQLTLADVL GQLLPFELPL VKYEIQGEYL YQALESAINA ATNNSVRGTG AGSFPYTYGL 480
  481 RYYYDGRRPL GERLFKLEMM PQDGQSLWYP VKQDALYVGV STSYTAAGKE GYHPLLQARW 540
  541 QESIDTLTLP QAFIRFLNRA PNPNFADLLS PHVHYTSHLK RSV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..583] PSI-BLAST 108.0 5'-NUCLEOTIDASE FROM E. COLI

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • phosphoprotein phosphatase activity
    		•  6.90309911517124 bayes_pls_golite062009
  • phosphoric ester hydrolase activity
    		•  6.76617976580319 bayes_pls_golite062009
  • phosphatase activity
    		•  6.28072946025083 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  5.93537144836081 bayes_pls_golite062009
  • protein serine/threonine phosphatase activity
    		•  5.11265802430394 bayes_pls_golite062009
  • hydrolase activity
    		•  2.06280293513737 bayes_pls_golite062009
  • catalytic activity
    		•  1.39852585255405 bayes_pls_golite062009
  • binding
    		•  0.607014751804583 bayes_pls_golite062009
  • calcium-dependent protein serine/threonine phosphatase activity
    		•  0.598330833036731 bayes_pls_golite062009
  • protein kinase activity
    		•  0.55395641922978 bayes_pls_golite062009
  • signal transducer activity
    		•  0.541715460439478 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.541715460439478 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  0.395006104431866 bayes_pls_golite062009
  • kinase activity
    		•  0.366390322110727 bayes_pls_golite062009
  • protein binding
    		•  0.184079020957384 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  2.39246790349923E-4 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle