YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|24347858, gi|...

General Information:
Name(s) found: gi|24373543 [NCBI NR]
gi|24347858 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|24373543|ref|NP_717586.1| MutT/nudix family protein [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24347858|gb|AAN55030.1|AE015641_2 MutT/nudix family protein [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 237 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process [ISSLink to PubMed article]
    Molecular Function: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEAEYLANY DPKAFKAQLL TVDAVLFTYH DQQLKVLLVQ RSNHPFLGLW GLPGGFIDET  60
   61 CDESLEQTVL RKLAEKTAVV PPYIEQLCTV GNNSRDARGW SVTVCYTALM SYQACQIQIA 120
  121 SVSDVKWWPL ADVLQMPLAF DHLQLIEQAR ERLTQKALYS LVPGFALSEP FTLPELQHVH 180
  181 EVLLGKPIQG KSFRRRVEQA DLLIDTGLKR TERGRPANLY CLKPDTASYR FLRNLEC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..237] PSI-BLAST 38.0 Crystal structure of Hypothetical protein BT0354

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transcription regulator activity
    		•  2.22556601647457 bayes_pls_golite062009
  • DNA binding
    		•  2.21146670711589 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.19019816052583 bayes_pls_golite062009
  • binding
    		•  1.87848671831941 bayes_pls_golite062009
  • transcription factor activity
    		•  1.41176606828436 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  0.19465912398512 bayes_pls_golite062009
  • transcription activator activity
    		•  0.0178778906463769 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle