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Protein Overview: RH57_ARATH

General Information:
Name(s) found: RH57_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • DEAD-box ATP-dependent RNA helicase 57 OS=Arabidopsis thaliana GN=RH57 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 541 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: NONE FOUND
    Molecular Function: nucleic acid binding [IEA]
    ATP binding [IEA]
    ATP-dependent helicase activity [IEA][ISS]
    helicase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKSSYFLFG GTNFNKKKFA PDFAKFKNST EDDDSNKKVN FFVEEEEDTE QPEAEKVIVS  60
   61 SKKRKRRSSN SVPVEGFDVF KSSKKARAKG KAEEQITKNE IVENPKKELN RQMERDALSR 120
  121 KQYSIHVSGN NIPPPLKSFA ELSSRYGCEG YILRNLAELG FKEPTPIQRQ AIPILLSGRE 180
  181 CFACAPTGSG KTFAFICPML IKLKRPSTDG IRAVILSPAR ELAAQTAREG KKLIKGSNFH 240
  241 IRLMTKPLVK TADFSKLWCD VLISTPMRLK RAIKAKKIDL SKVEYLVLDE SDKLFEQSLL 300
  301 KQIDCVVKAC SNPSIIRSLF SATLPDSVEE LARSIMHDAV RVIIGRKNTA SETVKQKLVF 360
  361 AGSEEGKLLA LRQSFAESLN PPVLIFVQSK ERAKELYDEL KCENIRAGVI HSDLPPGERE 420
  421 NAVDQFRAGE KWVLIATDVI ARGMDFKGIN CVINYDFPDS ASAYIHRIGR SGRAGRSGEA 480
  481 ITFYTEQDVP FLRNIANTMM SSGCEVPSWI MSLKKKKWRK HRPRRDSIST KPKADKNDTD 540
  541 E

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..131] deduced N/A No confident structure predictions are available.
    2 View Details [132..541] PSI-BLAST 88.69897 No description for 2i4iA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.90

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle