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View Structure Prediction Details

Protein: RH57_ARATH
Organism: Arabidopsis thaliana
Length: 541 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RH57_ARATH.

Description E-value Query
Range
Subject
Range
gi|114686445 - gi|114686445|ref|XP_525595.2| PREDICTED: DEAD box polypeptide 17 [Pan troglodytes]
383.0 [0..73] [532..205]

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Predicted Domain #1
Region A:
Residues: [1-131]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKSSYFLFG GTNFNKKKFA PDFAKFKNST EDDDSNKKVN FFVEEEEDTE QPEAEKVIVS  60
   61 SKKRKRRSSN SVPVEGFDVF KSSKKARAKG KAEEQITKNE IVENPKKELN RQMERDALSR 120
  121 KQYSIHVSGN N

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [132-541]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IPPPLKSFAE LSSRYGCEGY ILRNLAELGF KEPTPIQRQA IPILLSGREC FACAPTGSGK  60
   61 TFAFICPMLI KLKRPSTDGI RAVILSPARE LAAQTAREGK KLIKGSNFHI RLMTKPLVKT 120
  121 ADFSKLWCDV LISTPMRLKR AIKAKKIDLS KVEYLVLDES DKLFEQSLLK QIDCVVKACS 180
  181 NPSIIRSLFS ATLPDSVEEL ARSIMHDAVR VIIGRKNTAS ETVKQKLVFA GSEEGKLLAL 240
  241 RQSFAESLNP PVLIFVQSKE RAKELYDELK CENIRAGVIH SDLPPGEREN AVDQFRAGEK 300
  301 WVLIATDVIA RGMDFKGINC VINYDFPDSA SAYIHRIGRS GRAGRSGEAI TFYTEQDVPF 360
  361 LRNIANTMMS SGCEVPSWIM SLKKKKWRKH RPRRDSISTK PKADKNDTDE 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 88.69897
Match: 2i4iA
Description: No description for 2i4iA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle