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Protein Overview: gi|213852769

General Information:
Name(s) found: gi|213852769 [NCBI NR]
Description(s) found:
  • gi|213852769|ref|ZP_03382301.1| hypothetical protein SentesT_07856 [Salmonella enterica subsp. enterica serovar Typhi str. M223] [NCBI NR]
    • Organism: Salmonella enterica subsp. enterica serovar Typhi str. M223
    Length: 644 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNIFDHYRQR YEAAKDEEFT LQDFLTICRQ DRSAYANAAE RLLMAIGEPN MVDTAQEPRL  60
   61 SRLFSNRVIA RYPAFEEFYG MEDAIEQIVS YLKHAAQGLE EKKQILYLLG PVGGGKSSLA 120
  121 ERLKSLMQRV PIYVLSANGE RSPVNDHPLC LFNPQEDAQI LEKEYGIPRR YLGTIMSPWA 180
  181 AKHLHEFGGD ITKFRVVKVW PSILEQIAIA KTEPGDENNQ DISALVGKVD IRKLEHHAQN 240
  241 DPDAYGYSGA LCRANQGIME FVEMFKAPIK VLPPLLTATQ EGNYNGTEGI SALPFNGIIL 300
  301 AHSNESEWVT FRNNKNNEAF LDRVYIVKVP YCLRISEEIK IYEKLLNHSE LAHAPCAPGT 360
  361 LETLSRFSTL SRLKEPENSS IYSKMRVYDG ESLKDTDPKA KSYQEYRDYA GVDEGMNGLS 420
  421 TRFAFKILSR VFNFDHAEVA ANPVHLFYVL EQQIEREQFP QEQAERYLEF LKGYLIPKYA 480
  481 EFIGKEIQTA YLESYSEYGQ NIFDRYVTYA DFWIQDQEYR DPDTGQLFDR ESLNAELEKI 540
  541 EKPAGISNPK DFRNEIVNFV LRARANNSGR NPNWTSYEKL RTVIEKKMFS NTEELLPVIS 600
  601 FNAKTSTDEQ KKHDDFVDRM MEKGYTRKQV RLLCEWYLRV RKSS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..411] PSI-BLAST 45.522879 Crystal structure of sigm54 activator (AAA+ ATPase) in the inactive state
    2 View Details [412..474] PSI-BLAST 51.69897 Crystal structure of a sigma54-activator suggests the mechanism for the conformational switch necessary for sigma54 binding
    3 View Details [475..644] Pfam 72.251812 No description for PF06798.3 was found. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • purine ribonucleotide binding
    		•  1.77188881592277 bayes_pls_golite062009
  • ribonucleotide binding
    		•  1.7716739686218 bayes_pls_golite062009
  • purine nucleotide binding
    		•  1.7592051236943 bayes_pls_golite062009
  • nucleotide binding
    		•  1.7500232772987 bayes_pls_golite062009
  • ATP binding
    		•  1.47995731296981 bayes_pls_golite062009
  • adenyl ribonucleotide binding
    		•  1.44574285885277 bayes_pls_golite062009
  • two-component response regulator activity
    		•  1.42213431254922 bayes_pls_golite062009
  • adenyl nucleotide binding
    		•  1.41874021678514 bayes_pls_golite062009
  • binding
    		•  1.15116915808666 bayes_pls_golite062009
  • kinase activity
    		•  1.07775443369837 bayes_pls_golite062009
  • catalytic activity
    		•  1.00104173493322 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.896897432710546 bayes_pls_golite062009
  • protein kinase activity
    		•  0.756932393503009 bayes_pls_golite062009
  • hydrolase activity
    		•  0.502565068825558 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  0.447655793851911 bayes_pls_golite062009
  • transferase activity
    		•  0.168270793917772 bayes_pls_golite062009
  • protein serine/threonine kinase activity
    		•  0.120699179262929 bayes_pls_golite062009
  • protein binding
    		•  0.0523017713981208 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle