| Protein: | APC7-PA |
| Organism: | Drosophila melanogaster |
| Length: | 615 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for APC7-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
397.0 | [0..1] | [604..34] |
|
Region A: Residues: [1-139] |
1 11 21 31 41 51
| | | | | |
1 MASFLIVVEK MEIALFANAK KLYDHKLYEC VIPAADLLRT VLKNDRYVAT LDVEYQVLLY 60
61 LLNANYKERN YRAALRHFDE IIHKRRLMMR HKNAVLVAIE SSYPEFGDAE QRRRAAECYR 120
121 QIGNTDMAIE TLLQVPPTL
|
| Detection Method: |  |
| Confidence: | 6.69897 |
| Match: | 1ouvA |
| Description: | Helicobacter cysteine rich protein C (HcpC) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [140-538] |
1 11 21 31 41 51
| | | | | |
1 RSPRINLMLA RLQHHGSRHG TTKKSEAVLA YKEVIRECPM ALQVIEALLE LGVNGNEINS 60
61 LVMHAATVPD HFDWLSKWIK ALAQMFNFKH SDASQTFLML HDNTTLRCNE HLMMALGKCL 120
121 YYNGDYFQAE DIFSSTLCAN PDNVEAIGLM AVLCGQEGGC EQDSADMDYL FAKVSSEVKY 180
181 TASHWFAHAQ LLYDEGKFER GLNFVEKCLD SEPRNHEALI LRGRLLIALE RHTQAVCAFR 240
241 TAQMVAPYRF EIYRGLFHSY LAQKRFKEAN ALCNWTIRLF QNSPRSFTMF GRTLFLFPDP 300
301 RMRRTARKFA EKSLKINHIY TPAVNLIADI CQVEGPTKAI IKLLEKHVII FPKVNLLNHL 360
361 GDIMRKQKEP VKAMEYYYKA LRQDPKSKRT LRGLRLLAK
|
| Detection Method: | |
| Confidence: | 58.522879 |
| Match: | 1w3bA |
| Description: | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.52126334054344 | bayes_pls_golite062009 |
| protein binding | 1.52807685989528 | bayes_pls_golite062009 |
| enzyme binding | 0.44905827271946 | bayes_pls_golite062009 |
| nucleic acid binding | 0.41706917101675 | bayes_pls_golite062009 |
| transcription regulator activity | 0.322371143360832 | bayes_pls_golite062009 |
| hydrolase activity | 0.252678932946087 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 0.244038930707726 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 0.215617899962405 | bayes_pls_golite062009 |
| DNA binding | 0.17736976899009 | bayes_pls_golite062009 |
|
Region A: Residues: [539-615] |
1 11 21 31 41 51
| | | | | |
1 SDDESPVLDE SDDIGMDNQQ SINDLTTLCE ATNAQGAEGA ESVENSREAS SSAAARSGQE 60
61 EDVDEHDWID VPDGMSY
|
| Detection Method: | |
| Confidence: | 21.522879 |
| Match: | 2j9qA |
| Description: | No description for 2j9qA was found. |
