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View Structure Prediction Details

Protein: gcy-36
Organism: Caenorhabditis elegans
Length: 675 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gcy-36.

Description E-value Query
Range
Subject
Range
gi|157771796 - gi|157771796|ref|XP_001677718.1| Hypothetical protein CBG07710 [Caenorhabditis briggsae AF16]
gi|39596700, gi|... - gi|39596700|emb|CAE63319.1| Hypothetical protein CBG07710 [Caenorhabditis briggsae], gi|187033211|em...
562.0 [0..2] [675..1]

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Predicted Domain #1
Region A:
Residues: [1-113]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFGFIHESIR QLMIRTYGEA FWSKVLERAG FEAGKENIIN HYYSDADTFS LVDAVSVILK  60
   61 VTREQVWEMY GCFLIQYTME TGWDDLIRSM SPNLKGFLDN LDSLHYFIDH VVY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 43.09691
Match: 2o09A
Description: No description for 2o09A was found.

Predicted Domain #2
Region A:
Residues: [114-406]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KANLRGPSFR CEDNPDGTIT LHYYTGRPGL YPIVKGVLRE AAKRVFKLDV SMTITGRTQR  60
   61 SVQMATGERI EEHVIFLVKT LNTDQSNEEA LGTAVVQHSN NYKIRLTHMD FISTFPYHMV 120
  121 VDQDCKIVQV GRELYNHIPK DLLSVGTPLM RIFEVTRPQI PLDFDSICNF INAVFVLQVK 180
  181 TTPMEFQRNA NKRAAQAIEA SENLYEDNNG ALALSQSQHL KLKGQMMLMS SGGHIMYLCS 240
  241 PYVTSIPELL QYGLRLTAMP IHDPTRDLIL LNQQRLSDVE MNLQLEANNE QLE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.0
Match: 1lufA
Description: Musk tyrosine kinase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
guanylate cyclase activity 5.52874578464122 bayes_pls_golite062009
cyclase activity 4.4495441728539 bayes_pls_golite062009
phosphorus-oxygen lyase activity 4.17797478360781 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 3.27819936906601 bayes_pls_golite062009
kinase activity 3.03163710008327 bayes_pls_golite062009
protein kinase activity 2.8660447961069 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 2.74029785568283 bayes_pls_golite062009
protein serine/threonine kinase activity 2.59466621605752 bayes_pls_golite062009
protein binding 2.276111749106 bayes_pls_golite062009
binding 2.10874590528357 bayes_pls_golite062009
transferase activity 1.80001061545783 bayes_pls_golite062009
catalytic activity 1.21655087018101 bayes_pls_golite062009
purine ribonucleotide binding 1.01447477827105 bayes_pls_golite062009
ribonucleotide binding 1.01441566554376 bayes_pls_golite062009
purine nucleotide binding 1.0012255632847 bayes_pls_golite062009
nucleotide binding 0.989402689682387 bayes_pls_golite062009
receptor signaling protein serine/threonine kinase activity 0.734194601335452 bayes_pls_golite062009
ATP binding 0.59909499260393 bayes_pls_golite062009
adenyl ribonucleotide binding 0.574651252033402 bayes_pls_golite062009
adenyl nucleotide binding 0.553738346856309 bayes_pls_golite062009
receptor signaling protein activity 0.369966838509407 bayes_pls_golite062009
nucleic acid binding 0.289778841954859 bayes_pls_golite062009
signal transducer activity 0.270054246024761 bayes_pls_golite062009
molecular transducer activity 0.270054246024761 bayes_pls_golite062009
transcription regulator activity 0.269647063625821 bayes_pls_golite062009
protein tyrosine kinase activity 0.264291916981806 bayes_pls_golite062009
DNA binding 0.210479525543021 bayes_pls_golite062009
transmembrane receptor protein kinase activity 0.0556163711947139 bayes_pls_golite062009
transmembrane receptor activity 0.00652065412910241 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [407-675]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NMAKDLEVEK GKTDALLREM LPPSVAQQLK QGLSVEAREY EEATVMFTDV PTFQQIVPLC  60
   61 TPKDIVHLLN ELFTKFDRLI GIQKAYKVET VGDSYMSVGG IPDLVDDHCE VICHLALGMV 120
  121 MEARTVCDPI TNTPLHIRAG IHSGPVVAGV VGAKMPRYCL FGDTVNTSSR MESHSPIGRI 180
  181 HCSENAKKCA ESTGRFEFEP RGRVQIKGKG EMNTYFLLRS FKRSIWEIID RRRDENCNSI 240
  241 DGYNELREGY VDDVLNKVTQ KNSKTCSIS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 49.522879
Match: 1yk9A
Description: Crystal structure of a mutant form of the mycobacterial adenylyl cyclase Rv1625c
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle