| Protein: | CLCA_ECOLI |
| Organism: | Escherichia coli |
| Length: | 473 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CLCA_ECOLI.
| Description | E-value | Query Range |
Subject Range |
|
|
351.0 | [0..2] | [466..936] |
|
|
349.0 | [0..2] | [470..95] |
|
|
349.0 | [0..2] | [470..95] |
|
|
348.0 | [0..1] | [466..36] |
|
|
348.0 | [0..2] | [471..72] |
|
|
346.0 | [0..2] | [470..68] |
|
Region A: Residues: [1-473] |
1 11 21 31 41 51
| | | | | |
1 MKTDTPSLET PQAARLRRRQ LIRQLLERDK TPLAILFMAA VVGTLVGLAA VAFDKGVAWL 60
61 QNQRMGALVH TADNYPLLLT VAFLCSAVLA MFGYFLVRKY APEAGGSGIP EIEGALEDQR 120
121 PVRWWRVLPV KFFGGLGTLG GGMVLGREGP TVQIGGNIGR MVLDIFRLKG DEARHTLLAT 180
181 GAAAGLAAAF NAPLAGILFI IEEMRPQFRY TLISIKAVFI GVIMSTIMYR IFNHEVALID 240
241 VGKLSDAPLN TLWLYLILGI IFGIFGPIFN KWVLGMQDLL HRVHGGNITK WVLMGGAIGG 300
301 LCGLLGFVAP ATSGGGFNLI PIATAGNFSM GMLVFIFVAR VITTLLCFSS GAPGGIFAPM 360
361 LALGTVLGTA FGMVAVELFP QYHLEAGTFA IAGMGALLAA SIRAPLTGII LVLEMTDNYQ 420
421 LILPMIITGL GATLLAQFTG GKPLYSAILA RTLAKQEAEQ LARSKAASAS ENT
|
| Detection Method: |  |
| Confidence: | 80.69897 |
| Match: | 1kplA |
| Description: | Clc chloride channel |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| anion channel activity | 5.23649338477108 | bayes_pls_golite062009 |
| chloride channel activity | 5.23649338477108 | bayes_pls_golite062009 |
| anion transmembrane transporter activity | 4.7823647688311 | bayes_pls_golite062009 |
| voltage-gated chloride channel activity | 4.66898411574669 | bayes_pls_golite062009 |
| voltage-gated anion channel activity | 4.66898411574669 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 3.29532156100584 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 2.9211909958998 | bayes_pls_golite062009 |
| ion channel activity | 2.47371003999085 | bayes_pls_golite062009 |
| substrate-specific channel activity | 2.3506930471942 | bayes_pls_golite062009 |
| channel activity | 2.34190943501298 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 2.34190943501298 | bayes_pls_golite062009 |
| voltage-gated ion channel activity | 1.83450427449366 | bayes_pls_golite062009 |
| voltage-gated channel activity | 1.82456160587504 | bayes_pls_golite062009 |
| gated channel activity | 1.60884925346186 | bayes_pls_golite062009 |
| transporter activity | 1.42882449395305 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.27364043073575 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.11689211993777 | bayes_pls_golite062009 |
