| Protein: | TADA_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 1307 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TADA_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
966.0 | [0..1] | [1307..1] |
|
Region A: Residues: [1-87] |
1 11 21 31 41 51
| | | | | |
1 MFNTYTNSLQ WPIRSRNQQD YCSLLPERSE SYKLSKAYTS SRCYCVSSRS SCCCCCSTPS 60
61 SSSFVKPKVL INPGFVLYGV RQSTLIQ
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.720 | d.58.17 | Metal-binding domain |
| View | Download | 0.626 | d.58.49 | YajQ-like |
| View | Download | 0.579 | d.58.3 | Protease propeptides/inhibitors |
| View | Download | 0.533 | a.2.3 | Chaperone J-domain |
| View | Download | 0.514 | d.58.17 | Metal-binding domain |
|
Region A: Residues: [88-404] |
1 11 21 31 41 51
| | | | | |
1 WPSFQRRLLV GGGRLMGCEV YSSCDGIRRK NRSFKLRCLE ESDECCGGRS CSDDVEAMIS 60
61 FLSEELIDEE RKWNLVSRVK EKKKVGNVRK VSVEGSNSYG NGRVSQRVKK PEGFGRRKEI 120
121 KEDVKLNERY DCEHCGRRKK SSELESESRR GSKLVTGEYI GKSYRGDEER EVRPRRRKSS 180
181 SCSSYYSLAS SGEFESDTED QEEDVEIYRE NVRSSEKKVV DQSAKRLKSR KEASQMHSRK 240
241 KRDESSTGVD SRYQKQIFEE GENSNQAVTL NQRRRKKFSQ TENRVSESTG NYEEDMEIHE 300
301 VHVNDAETSS QNQKLFN
|
| Detection Method: | |
| Confidence: | 25.522879 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [405-553] |
1 11 21 31 41 51
| | | | | |
1 EREDYRVHSI RNDSGNENIE SSQHQLKERL ETRYSSEDRV SEMRRRTKYS SSQEEGINVL 60
61 QNFPEVTNNQ QPLVEERISK QAGTRRTTEH ISESSEIHDI DIRNTYVSQR EDQIRNQEVH 120
121 AGLVSGLQSE RKQQDYHIEH NPLQTTQSD
|
| Detection Method: | |
| Confidence: | 6.0 |
| Match: | 2iw5A |
| Description: | No description for 2iw5A was found. |
| Term | Confidence | Notes |
| transcription regulator activity | 2.47101232597734 | bayes_pls_golite062009 |
| DNA binding | 1.99585201775848 | bayes_pls_golite062009 |
| nucleic acid binding | 1.79618612866073 | bayes_pls_golite062009 |
| transcription factor activity | 1.69295668337614 | bayes_pls_golite062009 |
| binding | 1.095333525217 | bayes_pls_golite062009 |
|
Region A: Residues: [554-797] |
1 11 21 31 41 51
| | | | | |
1 RTSVSVSHTS DAVRYTEIQR KSEKRLIGQG STTAVQSDSK VEKNGAQKED SRLDHANSKK 60
61 DGQTTLGLQS YQSKLSEEAS SSQSSLMASR TKLQLVDLVS EEMQGSETTL IPPSSQLVSR 120
121 RSGQSYRTGG VSIQEISHGT SESGYTTAFE HPRAGASVNS QSAGELMGFT SHEDAMGSAH 180
181 RLEQASEKYV GEFVKKAKHG VINPETEEQR AESNQLKRRD SRRSSGGSGA KGPSDEMWVT 240
241 DSAQ
|
| Detection Method: | |
| Confidence: | 10.09691 |
| Match: | 2dfsA |
| Description: | No description for 2dfsA was found. |
|
Region A: Residues: [798-866] |
1 11 21 31 41 51
| | | | | |
1 GTPHPGATEG NAAVGNAIFK RNGRSLWNVI ADIARLRWGS RAGSPDSSAK PAGRSSPNES 60
61 VSSATWFSG
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [867-1105] |
1 11 21 31 41 51
| | | | | |
1 REHDGSSDDN TKGDKVLPQE APSLHQVEVG QTSPRSQSEY PGTTKLKQRS ERHEGVVSSP 60
61 SSTILEGGSV SNRMSSTSGN QIVGVDEEEG GNFEFRLPET ALTEVPMKLP SRNLIRSPPI 120
121 KESSESSLTE ASSDQNFTVG EGRRYPRMDA GQNPLLFPGR NLRSPAVMEP PVPRPRMVSG 180
181 SSSLREQVEQ QQPLSAKSQE ETGSVSADSA LIQRKLQRNK QVVRDSFEEW EEAYKVEAE
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [1106-1307] |
1 11 21 31 41 51
| | | | | |
1 RRTVDEIFMR EALVEAKKAA DTWEVPVGAV LVHDGKIIAR GYNLVEELRD STAHAEMICI 60
61 REGSKALRSW RLADTTLYVT LEPCPMCAGA ILQARVNTLV WGAPNKLLGA DGSWIRLFPG 120
121 GEGNGSEASE KPPPPVHPFH PKMTIRRGVL ESECAQTMQQ FFQLRRKKKD KNSDPPTPTD 180
181 HHHHHLPKLL NKMHQVLPFF CL
|
| Detection Method: | |
| Confidence: | 65.522879 |
| Match: | 1z3aA |
| Description: | Crystal structure of tRNA adenosine deaminase TadA from Escherichia coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 2.07800438828306 | bayes_pls_golite062009 |
| methyltransferase activity | 1.73753215913649 | bayes_pls_golite062009 |
| transferase activity, transferring one-carbon groups | 1.66914541186463 | bayes_pls_golite062009 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | 0.516651342237498 | bayes_pls_golite062009 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 0.385948807040181 | bayes_pls_golite062009 |
| hydrolase activity | 0.34203636465094 | bayes_pls_golite062009 |
| transferase activity | 0.268221683084535 | bayes_pls_golite062009 |
| deaminase activity | 0.100786900220128 | bayes_pls_golite062009 |
