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View Structure Prediction Details

Protein: MAP21_ARATH
Organism: Arabidopsis thaliana
Length: 441 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MAP21_ARATH.

Description E-value Query
Range
Subject
Range
gi|11320962 - gi|11320962|gb|AAG33978.1|AF250964_1 methionine aminopeptidase-like protein [Arabidopsis thaliana]
390.0 [0..1] [441..1]

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Predicted Domain #1
Region A:
Residues: [1-86]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIGNPEVAT MGKENTEAES SNGNESQLSS DLTKSLDLAE VKEDEKDNNQ EEEDGLKAEA  60
   61 STKKKKKKSK SKKKKSSLQQ TDPPSI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [87-441]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PVLELFPSGD FPQGEIQQYN DDNLWRTTSE EKREMERLQK PIYNSLRQAA EVHRQVRKYM  60
   61 RSILKPGMLM IDLCETLENT VRKLISENGL QAGIAFPTGC SLNNVAAHWT PNSGDKTVLQ 120
  121 YDDVMKLDFG THIDGHIVDS AFTVAFNPMF DPLLAASRDA TYTGIKEAGV DVRLCDVGAA 180
  181 VQEVMESYEV EINGKVYQVK SIRNLNGHSI GRYQIHAEKS VPNVRGGEQT KMEEGELYAI 240
  241 ETFGSTGKGY VREDLECSHY MKNYDVGHVP LRLPRAKQLL ATINKNFSTL AFCRRYLDRL 300
  301 GETKYLMALK NLCDSGIIEP CPPVCDVKGS YISQFEHTIL LRPTCKEIIS KGDDY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 96.522879
Match: 1b59A
Description: Methionine aminopeptidase, insert domain; Methionine aminopeptidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
peptidase activity 2.7189621129065 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 2.38980167546425 bayes_pls_golite062009
hydrolase activity 1.43646476372001 bayes_pls_golite062009
aminopeptidase activity 0.89399203910285 bayes_pls_golite062009
metallopeptidase activity 0.889549933008962 bayes_pls_golite062009
exopeptidase activity 0.816201549553251 bayes_pls_golite062009
binding 0.668489274805168 bayes_pls_golite062009
protein binding 0.378185804009078 bayes_pls_golite062009
nucleic acid binding 0.202664114377071 bayes_pls_golite062009
catalytic activity 0.148551873544128 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle