| Protein: | PXC2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 967 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PXC2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
570.0 | [0..15] | [967..13] |
|
Region A: Residues: [1-325] |
1 11 21 31 41 51
| | | | | |
1 MFNGAVSLLF LFLAVVSARA DPTFNDDVLG LIVFKAGLDD PLSKLSSWNS EDYDPCNWVG 60
61 CTCDPATNRV SELRLDAFSL SGHIGRGLLR LQFLHTLVLS NNNLTGTLNP EFPHLGSLQV 120
121 VDFSGNNLSG RIPDGFFEQC GSLRSVSLAN NKLTGSIPVS LSYCSTLTHL NLSSNQLSGR 180
181 LPRDIWFLKS LKSLDFSHNF LQGDIPDGLG GLYDLRHINL SRNWFSGDVP SDIGRCSSLK 240
241 SLDLSENYFS GNLPDSMKSL GSCSSIRLRG NSLIGEIPDW IGDIATLEIL DLSANNFTGT 300
301 VPFSLGNLEF LKDLNLSANM LAGEL
|
| Detection Method: |  |
| Confidence: | 39.69897 |
| Match: | 1ogqA |
| Description: | Polygalacturonase inhibiting protein PGIP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| receptor activity | 1.6451343151124 | bayes_pls_golite062009 |
| transmembrane receptor activity | 1.47678358397695 | bayes_pls_golite062009 |
| binding | 1.44369481405695 | bayes_pls_golite062009 |
| collagen binding | 1.2875576699443 | bayes_pls_golite062009 |
| G-protein coupled receptor activity | 0.8729941432071 | bayes_pls_golite062009 |
| receptor binding | 0.778609452126074 | bayes_pls_golite062009 |
| nucleic acid binding | 0.731338981213395 | bayes_pls_golite062009 |
| protein binding | 0.646159692466759 | bayes_pls_golite062009 |
| signal transducer activity | 0.405945668463821 | bayes_pls_golite062009 |
| molecular transducer activity | 0.405945668463821 | bayes_pls_golite062009 |
|
Region A: Residues: [326-406] |
1 11 21 31 41 51
| | | | | |
1 PQTLSNCSNL ISIDVSKNSF TGDVLKWMFT GNSESSSLSR FSLHKRSGND TIMPIVGFLQ 60
61 GLRVLDLSSN GFTGELPSNI W
|
| Detection Method: | |
| Confidence: | 14.30103 |
| Match: | 2z80A |
| Description: | No description for 2z80A was found. |
|
Region A: Residues: [407-649] |
1 11 21 31 41 51
| | | | | |
1 ILTSLLQLNM STNSLFGSIP TGIGGLKVAE ILDLSSNLLN GTLPSEIGGA VSLKQLHLHR 60
61 NRLSGQIPAK ISNCSALNTI NLSENELSGA IPGSIGSLSN LEYIDLSRNN LSGSLPKEIE 120
121 KLSHLLTFNI SHNNITGELP AGGFFNTIPL SAVTGNPSLC GSVVNRSCLS VHPKPIVLNP 180
181 NSSNPTNGPA LTGQIRKSVL SISALIAIGA AAVIAIGVVA VTLLNVHARS SVSRHDAAAA 240
241 LAL
|
| Detection Method: | |
| Confidence: | 6.08 |
| Match: | 1ogqA |
| Description: | Polygalacturonase inhibiting protein PGIP |
| Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.45712316705811 | bayes_pls_golite062009 |
| receptor activity | 1.44447187979035 | bayes_pls_golite062009 |
| transmembrane receptor activity | 1.27990757981429 | bayes_pls_golite062009 |
| collagen binding | 1.17455662051919 | bayes_pls_golite062009 |
| nucleic acid binding | 0.756214936132241 | bayes_pls_golite062009 |
| receptor binding | 0.737703533373466 | bayes_pls_golite062009 |
| G-protein coupled receptor activity | 0.641075552348539 | bayes_pls_golite062009 |
| protein binding | 0.629660151009639 | bayes_pls_golite062009 |
| signal transducer activity | 0.272714541834901 | bayes_pls_golite062009 |
| molecular transducer activity | 0.272714541834901 | bayes_pls_golite062009 |
|
Region A: Residues: [650-967] |
1 11 21 31 41 51
| | | | | |
1 SVGETFSCSP SKDQEFGKLV MFSGEVDVFD TTGADALLNK DSELGRGGFG VVYKTSLQDG 60
61 RPVAVKKLTV SGLIKSQEEF EREMRKLGKL RHKNVVEIKG YYWTQSLQLL IHEFVSGGSL 120
121 YRHLHGDESV CLTWRQRFSI ILGIARGLAF LHSSNITHYN MKATNVLIDA AGEAKVSDFG 180
181 LARLLASALD RCVLSGKVQS ALGYTAPEFA CRTVKITDRC DVYGFGILVL EVVTGKRPVE 240
241 YAEDDVVVLC ETVREGLEEG RVEECVDPRL RGNFPAEEAI PVIKLGLVCG SQVPSNRPEM 300
301 EEVVKILELI QCPSHDLE
|
| Detection Method: | |
| Confidence: | 70.154902 |
| Match: | 2qkwB |
| Description: | No description for 2qkwB was found. |
