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Protein Overview: BAME1_ARATH

General Information:
Name(s) found: BAME1_ARATH [Swiss-Prot]
Description(s) found:
Found 19 descriptions.
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  • Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 OS=Arabidopsis thaliana GN=BAM1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 1003 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDA]
    Biological Process: regulation of meristem growth [IGI]
    anther development [IGI]
    microsporocyte differentiation [IGI]
    gametophyte development [IGI]
    transmembrane receptor protein tyrosine kinase signaling pathway [ISS]
    floral organ development [IGI]
    protein amino acid phosphorylation [ISS]
    regulation of meristem structural organization [IGI]
    Molecular Function: ATP binding [ISS]
    protein serine/threonine kinase activity [ISS]
    kinase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLFLLLLFL LHISHTFTAS RPISEFRALL SLKTSLTGAG DDKNSPLSSW KVSTSFCTWI  60
   61 GVTCDVSRRH VTSLDLSGLN LSGTLSPDVS HLRLLQNLSL AENLISGPIP PEISSLSGLR 120
  121 HLNLSNNVFN GSFPDEISSG LVNLRVLDVY NNNLTGDLPV SVTNLTQLRH LHLGGNYFAG 180
  181 KIPPSYGSWP VIEYLAVSGN ELVGKIPPEI GNLTTLRELY IGYYNAFEDG LPPEIGNLSE 240
  241 LVRFDGANCG LTGEIPPEIG KLQKLDTLFL QVNVFSGPLT WELGTLSSLK SMDLSNNMFT 300
  301 GEIPASFAEL KNLTLLNLFR NKLHGEIPEF IGDLPELEVL QLWENNFTGS IPQKLGENGK 360
  361 LNLVDLSSNK LTGTLPPNMC SGNKLETLIT LGNFLFGSIP DSLGKCESLT RIRMGENFLN 420
  421 GSIPKGLFGL PKLTQVELQD NYLSGELPVA GGVSVNLGQI SLSNNQLSGP LPPAIGNFTG 480
  481 VQKLLLDGNK FQGPIPSEVG KLQQLSKIDF SHNLFSGRIA PEISRCKLLT FVDLSRNELS 540
  541 GEIPNEITAM KILNYLNLSR NHLVGSIPGS ISSMQSLTSL DFSYNNLSGL VPGTGQFSYF 600
  601 NYTSFLGNPD LCGPYLGPCK DGVAKGGHQS HSKGPLSASM KLLLVLGLLV CSIAFAVVAI 660
  661 IKARSLKKAS ESRAWRLTAF QRLDFTCDDV LDSLKEDNII GKGGAGIVYK GVMPNGDLVA 720
  721 VKRLAAMSRG SSHDHGFNAE IQTLGRIRHR HIVRLLGFCS NHETNLLVYE YMPNGSLGEV 780
  781 LHGKKGGHLH WDTRYKIALE AAKGLCYLHH DCSPLIVHRD VKSNNILLDS NFEAHVADFG 840
  841 LAKFLQDSGT SECMSAIAGS YGYIAPEYAY TLKVDEKSDV YSFGVVLLEL VTGRKPVGEF 900
  901 GDGVDIVQWV RKMTDSNKDS VLKVLDPRLS SIPIHEVTHV FYVAMLCVEE QAVERPTMRE 960
  961 VVQILTEIPK LPPSKDQPMT ESAPESELSP KSGVQSPPDL LNL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..327] PSI-BLAST 51.221849 Polygalacturonase inhibiting protein PGIP
    2 View Details [328..372] PSI-BLAST 25.0 Reticulon 4 receptor (Nogo-66 receptor, Ngr)
    3 View Details [373..670] FFAS03 6.61 Polygalacturonase inhibiting protein PGIP
    4 View Details [671..1003] PSI-BLAST 69.0 No description for 2qkwB was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • receptor activity
    		•  3.83269261081332 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  3.75945815830294 bayes_pls_golite062009
  • G-protein coupled receptor activity
    		•  3.09281229196379 bayes_pls_golite062009
  • molecular transducer activity
    		•  2.99319600166105 bayes_pls_golite062009
  • signal transducer activity
    		•  2.99319600166105 bayes_pls_golite062009
  • binding
    		•  1.87302803330255 bayes_pls_golite062009
  • receptor binding
    		•  1.66628371061052 bayes_pls_golite062009
  • transmembrane receptor protein kinase activity
    		•  1.50579173120225 bayes_pls_golite062009
  • glycosaminoglycan binding
    		•  1.47047886487324 bayes_pls_golite062009
  • protein kinase activity
    		•  1.43632437878638 bayes_pls_golite062009
  • collagen binding
    		•  1.31548082127061 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.31434688144553 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  1.16530645523007 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.12585418084562 bayes_pls_golite062009
  • kinase activity
    		•  1.11577341189523 bayes_pls_golite062009
  • transmembrane receptor protein tyrosine kinase activity
    		•  0.925064573334258 bayes_pls_golite062009
  • protein binding
    		•  0.646159692466759 bayes_pls_golite062009
  • protein-hormone receptor activity
    		•  0.42902267001067 bayes_pls_golite062009
  • extracellular matrix binding
    		•  0.347753255340891 bayes_pls_golite062009
  • heparin binding
    		•  0.342156171222462 bayes_pls_golite062009
  • polysaccharide binding
    		•  0.34063289254939 bayes_pls_golite062009
  • pattern binding
    		•  0.339536765321749 bayes_pls_golite062009
  • protein tyrosine kinase activity
    		•  0.231213253402712 bayes_pls_golite062009
  • enzyme regulator activity
    		•  0.154501444195573 bayes_pls_golite062009
  • growth factor binding
    		•  0.0358215683345522 bayes_pls_golite062009
    2 No functions predicted.
    3
    Term Confidence Notes
  • receptor activity
    		•  3.63203017549127 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  3.56258215414028 bayes_pls_golite062009
  • G-protein coupled receptor activity
    		•  2.86089370110523 bayes_pls_golite062009
  • molecular transducer activity
    		•  2.85996487503213 bayes_pls_golite062009
  • signal transducer activity
    		•  2.85996487503213 bayes_pls_golite062009
  • binding
    		•  1.88645638630371 bayes_pls_golite062009
  • receptor binding
    		•  1.62537779185792 bayes_pls_golite062009
  • protein kinase activity
    		•  1.44543786404772 bayes_pls_golite062009
  • transmembrane receptor protein kinase activity
    		•  1.39264933048518 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.33922283636437 bayes_pls_golite062009
  • glycosaminoglycan binding
    		•  1.31428931575251 bayes_pls_golite062009
  • collagen binding
    		•  1.2024797718455 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  1.18001333603647 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.14774707593524 bayes_pls_golite062009
  • kinase activity
    		•  1.13356668527648 bayes_pls_golite062009
  • transmembrane receptor protein tyrosine kinase activity
    		•  0.831155397246448 bayes_pls_golite062009
  • protein binding
    		•  0.629660151009639 bayes_pls_golite062009
  • heparin binding
    		•  0.277971593709408 bayes_pls_golite062009
  • pattern binding
    		•  0.218511437528696 bayes_pls_golite062009
  • polysaccharide binding
    		•  0.201838575206714 bayes_pls_golite062009
  • protein tyrosine kinase activity
    		•  0.176363297428464 bayes_pls_golite062009
  • enzyme regulator activity
    		•  0.143284785584541 bayes_pls_golite062009
  • extracellular matrix binding
    		•  0.137428338289148 bayes_pls_golite062009
  • protein-hormone receptor activity
    		•  0.0124918555036033 bayes_pls_golite062009
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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