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View Structure Prediction Details

Protein: GATA_ARATH
Organism: Arabidopsis thaliana
Length: 537 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GATA_ARATH.

Description E-value Query
Range
Subject
Range
GATA_METMA - Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM 364...
GATA_METMA - Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanosarcina mazei GN=gatA PE=3 SV=1
563.0 [0..44] [534..6]

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Predicted Domain #1
Region A:
Residues: [1-537]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSTLQPPRS LSLLPLRRFQ ISKTIVSAAS SKTIDTSVIS PPQSQILTTR RSLLSGETTA  60
   61 VEIAKSYLSR IRLTEPQLKC FLHVSENVLK DAQEIDQRIA KGEELGPLAG VLIGVKDNIC 120
  121 TQGMPSTAAS RILEHYRPPF DATAVKKIKE LGGIVVGKTN MDEFGMGSTT EASAFQVTAN 180
  181 PWDLSRVPGG SSGGSAAAVA ARQCMVSLGS DTGGSVRQPA SFCGVVGLKP TYGRVSRFGL 240
  241 MAYASSLDVI GCFGSTVADA GMLLHAISGY DRFDSTSSKQ DVPEFQSQFL SVDHFESKPL 300
  301 NGVKVGIIRE TLEDGVDSGV RSATQEAASH LEALGCILTE VSLPSFSLGL PAYYVIASSE 360
  361 SSSNLSRYDG VRYGNQVMAE ELNKLYECSR GEGFGGEVKM RILMGTYALS AGYYDAYYKR 420
  421 AQQVRTLIRK DFKAALEQND ILISPAAPSA AYKIGEKKDD PLAMYAGDIM TVNVNLAGLP 480
  481 AMVLPCGLVE GGPSGLPVGL QMIGAAFDEE KLLKVGHIFE QTLKGSSFVP PLLANVA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 141.0
Match: 2df4A
Description: No description for 2df4A was found.

Predicted functions:

Term Confidence Notes
glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity 7.42914157198604 bayes_pls_golite062009
ligase activity 3.16753436373904 bayes_pls_golite062009
binding 1.67838702617972 bayes_pls_golite062009
hydrolase activity 1.16287375250451 bayes_pls_golite062009
catalytic activity 0.906509857495572 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds 0.301483171038292 bayes_pls_golite062009
protein binding 0.276132955069873 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle