Protein: | PTR4_ARATH |
Organism: | Arabidopsis thaliana |
Length: | 586 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PTR4_ARATH.
Description | E-value | Query Range |
Subject Range |
|
349.0 | [0..5] | [565..2] |
Region A: Residues: [1-450] |
1 11 21 31 41 51 | | | | | | 1 MTVEEVGDDY TKDGTVDLRG NRVRRSQTGR WKACSFVVVY EVFERMAYYG ISSNLVIYMT 60 61 TKLHQGTVKS SNNVTNWVGT SWLTPILGAY VADAHFGRYI TFVISSAIYL LGMALLTLSV 120 121 SLPGLKPPKC STANVENCEK ASVIQLAVFF GALYTLAIGT GGTKPNISTI GADQFDEFDP 180 181 KDKIHKHSFF NWWMFSIFFG TFFATTVLVY VQDNVGWAIG YGLSTLGLAF SIFIFLLGTR 240 241 LYRHKLPMGS PFTKMARVIV ASLRKAREPM SSDSTRFYEL PPMEYASKRA FPIHSTSSLR 300 301 FLNRASLKTG STHKWRLCTI TEVEETKQML KMLPVLFVTF VPSMMLAQIM TLFIKQGTTL 360 361 DRRLTNNFSI PPASLLGFTT FSMLVSIVIY DRVFVKFMRK LTGNPRGITL LQRMGIGMIL 420 421 HILIMIIASI TERYRLKVAA EHGLTHQTAV |
Detection Method: | |
Confidence: | 5.30103 |
Match: | 1pw4A |
Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
transporter activity | 4.09176719149278 | bayes_pls_golite062009 |
transmembrane transporter activity | 3.5865018981083 | bayes_pls_golite062009 |
substrate-specific transporter activity | 3.3426261924492 | bayes_pls_golite062009 |
substrate-specific transmembrane transporter activity | 3.29689809004391 | bayes_pls_golite062009 |
organic acid transmembrane transporter activity | 2.15783210522667 | bayes_pls_golite062009 |
ion transmembrane transporter activity | 1.94035843948137 | bayes_pls_golite062009 |
active transmembrane transporter activity | 1.59419818573076 | bayes_pls_golite062009 |
cation transmembrane transporter activity | 1.5181741634556 | bayes_pls_golite062009 |
secondary active transmembrane transporter activity | 1.22264637452409 | bayes_pls_golite062009 |
binding | 1.04171109022636 | bayes_pls_golite062009 |
polyol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
alcohol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
glycerol transmembrane transporter activity | 0.812001619402678 | bayes_pls_golite062009 |
symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
solute:cation symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
cation:sugar symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
sugar:hydrogen symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
Region A: Residues: [451-586] |
1 11 21 31 41 51 | | | | | | 1 PIPLSIFTLL PQYVLMGLAD AFIEIAKLEF FYDQAPESMK SLGTSYTSTS MAVGYFMSSI 60 61 LLSSVSQITK KQGRGWIQNN LNESRLDNYY MFFAVLNLLN FILFLVVIRF YEYRADVTQS 120 121 ANVEQKEPNM VDNYNE |
Detection Method: | |
Confidence: | 1.56 |
Match: | 1pw4A |
Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |