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View Structure Prediction Details

Protein: LAC5_ARATH
Organism: Arabidopsis thaliana
Length: 580 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LAC5_ARATH.

Description E-value Query
Range
Subject
Range
LAC12_ARATH - Laccase-12 OS=Arabidopsis thaliana GN=LAC12 PE=2 SV=1
520.0 [0..3] [580..1]

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Predicted Domain #1
Region A:
Residues: [1-580]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVTKSLLCF ISFVAFLLFS SVAEANKAHH HEFIIQATKV KRLCETHNSI TVNGMFPGPM  60
   61 LVVNNGDTLV VKVINRARYN ITIHWHGVRQ MRTGWADGPE FVTQCPIRPG SSYTYRFTIQ 120
  121 GQEGTLWWHA HSSWLRATVY GSLLVFPPAG SSYPFTKPHR NVPLLLGEWW DANPVDVLRE 180
  181 SIRTGGAPNN SDAYTINGQP GDLYKCSSQD TTVVPINVGE TILLRVINSA LNQPLFFTVA 240
  241 NHKLTVVGAD ASYLKPFTTN VIVLGPGQTT DVLITGDQPP NRYYMAARAY QSAQNAPFGN 300
  301 TTTTAILQYK SAPCCGVGGG SGTKKGNSFK PIMPILPAYN DTNTVTRFSQ SFRSLRRAEV 360
  361 PTEIDENLFV TIGLGLNNCP KNFRSRRCQG PNGTRFTASM NNVSFALPSN YSLLQAHHHG 420
  421 IPGVFTTDFP AKPPVKFDYT GNNISRSLYQ PDRGTKLYKL KYGSRVQIVL QDTGIVTPEN 480
  481 HPIHLHGYDF YIIAEGFGNF NPKKDTAKFN LEDPPLRNTV GVPVNGWAVI RFIADNPGVW 540
  541 IMHCHLDAHI SWGLAMAFLV ENGNGVLQTI EQPPHDLPVC 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 107.0
Match: 1aozA
Description: Ascorbate oxidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
oxidoreductase activity, oxidizing metal ions 6.65192723037124 bayes_pls_golite062009
hydrogen ion transmembrane transporter activity 6.31879033933655 bayes_pls_golite062009
cation transmembrane transporter activity 5.08231506697861 bayes_pls_golite062009
ion transmembrane transporter activity 4.97613096658411 bayes_pls_golite062009
inorganic cation transmembrane transporter activity 4.59563513647911 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 4.5497559272853 bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity 3.81325448081642 bayes_pls_golite062009
metal ion transmembrane transporter activity 3.07382952844477 bayes_pls_golite062009
transition metal ion transmembrane transporter activity 2.9428517783106 bayes_pls_golite062009
transporter activity 2.75690053147562 bayes_pls_golite062009
substrate-specific transporter activity 2.68353223516483 bayes_pls_golite062009
transmembrane transporter activity 2.67027550825653 bayes_pls_golite062009
ferroxidase activity 2.11615717093435 bayes_pls_golite062009
oxidoreductase activity, oxidizing metal ions, oxygen as acceptor 2.11615717093435 bayes_pls_golite062009
di-, tri-valent inorganic cation transmembrane transporter activity 1.88441243755534 bayes_pls_golite062009
oxidoreductase activity 1.49034416929059 bayes_pls_golite062009
copper ion binding 1.25908701147207 bayes_pls_golite062009
iron ion transmembrane transporter activity 1.17954317549442 bayes_pls_golite062009
binding 1.14851914699653 bayes_pls_golite062009
copper ion transmembrane transporter activity 0.96418286916503 bayes_pls_golite062009
catalytic activity 0.363071622766357 bayes_pls_golite062009
metal ion binding 0.305777337672225 bayes_pls_golite062009
cation binding 0.305777337672225 bayes_pls_golite062009
ion binding 0.300057966011705 bayes_pls_golite062009
active transmembrane transporter activity 0.269767937058687 bayes_pls_golite062009
transition metal ion binding 0.262778393547427 bayes_pls_golite062009
primary active transmembrane transporter activity 0.246123492452788 bayes_pls_golite062009
heme-copper terminal oxidase activity 0.233785530643069 bayes_pls_golite062009
protein binding 0.19183671060378 bayes_pls_golite062009
cytochrome-c oxidase activity 0.0760986706873972 bayes_pls_golite062009
oxidoreductase activity, acting on heme group of donors, oxygen as acceptor 0.0760986706873972 bayes_pls_golite062009
oxidoreductase activity, acting on heme group of donors 0.0760986706873972 bayes_pls_golite062009
receptor binding 0.0601969032951899 bayes_pls_golite062009
signal transducer activity 0.049534674746601 bayes_pls_golite062009
molecular transducer activity 0.049534674746601 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle