| Protein: | TRB2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 299 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TRB2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
175.0 | [0..1] | [299..1] |
|
Region A: Residues: [1-116] |
1 11 21 31 41 51
| | | | | |
1 MGAPKQKWTP EEEAALKAGV LKHGTGKWRT ILSDTEFSLI LKSRSNVDLK DKWRNISVTA 60
61 LWGSRKKAKL ALKRTPPGTK QDDNNTALTI VALTNDDERA KPTSPGGSGG GSPRTC
|
| Detection Method: |  |
| Confidence: | 15.39794 |
| Match: | 1h8aC |
| Description: | v-Myb |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.334577365229545 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0696342306231097 | bayes_pls_golite062009 |
|
Region A: Residues: [117-225] |
1 11 21 31 41 51
| | | | | |
1 ASKRSITSLD KIIFEAITNL RELRGSDRTS IFLYIEENFK TPPNMKRHVA VRLKHLSSNG 60
61 TLVKIKHKYR FSSNFIPAGA RQKAPQLFLE GNNKKDPTKP EENGANSLT
|
| Detection Method: | |
| Confidence: | 9.522879 |
| Match: | 1hstA |
| Description: | Histone H5, globular domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.835523092977445 | bayes_pls_golite062009 |
| transcription regulator activity | 0.4843036104266 | bayes_pls_golite062009 |
| nucleic acid binding | 0.37117756729668 | bayes_pls_golite062009 |
| DNA binding | 0.3118855114645 | bayes_pls_golite062009 |
|
Region A: Residues: [226-299] |
1 11 21 31 41 51
| | | | | |
1 KFRVDGELYM IKGMTAQEAA EAAARAVAEA EFAITEAEQA AKEAERAEAE AEAAQIFAKA 60
61 AMKALKFRIR NHPW
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
