Protein: | TRB2_ARATH |
Organism: | Arabidopsis thaliana |
Length: | 299 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TRB2_ARATH.
Description | E-value | Query Range |
Subject Range |
|
175.0 | [0..1] | [299..1] |
Region A: Residues: [1-116] |
1 11 21 31 41 51 | | | | | | 1 MGAPKQKWTP EEEAALKAGV LKHGTGKWRT ILSDTEFSLI LKSRSNVDLK DKWRNISVTA 60 61 LWGSRKKAKL ALKRTPPGTK QDDNNTALTI VALTNDDERA KPTSPGGSGG GSPRTC |
Detection Method: | |
Confidence: | 15.39794 |
Match: | 1h8aC |
Description: | v-Myb |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
binding | 0.334577365229545 | bayes_pls_golite062009 |
transcription regulator activity | 0.0696342306231097 | bayes_pls_golite062009 |
Region A: Residues: [117-225] |
1 11 21 31 41 51 | | | | | | 1 ASKRSITSLD KIIFEAITNL RELRGSDRTS IFLYIEENFK TPPNMKRHVA VRLKHLSSNG 60 61 TLVKIKHKYR FSSNFIPAGA RQKAPQLFLE GNNKKDPTKP EENGANSLT |
Detection Method: | |
Confidence: | 9.522879 |
Match: | 1hstA |
Description: | Histone H5, globular domain |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
binding | 0.835523092977445 | bayes_pls_golite062009 |
transcription regulator activity | 0.4843036104266 | bayes_pls_golite062009 |
nucleic acid binding | 0.37117756729668 | bayes_pls_golite062009 |
DNA binding | 0.3118855114645 | bayes_pls_golite062009 |
Region A: Residues: [226-299] |
1 11 21 31 41 51 | | | | | | 1 KFRVDGELYM IKGMTAQEAA EAAARAVAEA EFAITEAEQA AKEAERAEAE AEAAQIFAKA 60 61 AMKALKFRIR NHPW |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.