YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|9759130, gi|1...
Organism: Arabidopsis thaliana
Length: 204 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|9759130, gi|1....

Description E-value Query
Range
Subject
Range
gi|21553927 - gi|21553927|gb|AAM63010.1| unknown [Arabidopsis thaliana]
186.0 [0..1] [204..1]

Back

Predicted Domain #1
Region A:
Residues: [1-204]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLIVDDDND GEVLIPPPNF SMVEDEIYRS GFPELENFGF LSTLNLRSII YLCPEPYPED  60
   61 NLKSLASNNI KLFQFGIEGK TDPPTPMPKD TVLSALRVLV DVRNHPILIH CKRGKHRTGC 120
  121 LVGCLRKVQN WCLSSVLEEY QKCAGLKWRQ RDLRFIEDFD VLRLKQCLYS IIYQYNGYGL 180
  181 KRRKLLYQEE NVVQEQQKPQ ATKG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 34.154902
Match: 1xriA
Description: X-ray structure of a putative phosphoprotein phosphatase from Arabidopsis thaliana gene AT1G05000
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.94343241290871 bayes_pls_golite062009
phosphoprotein phosphatase activity 1.63395364913824 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 1.18733644522437 bayes_pls_golite062009
phosphatase activity 1.13967129037768 bayes_pls_golite062009
protein tyrosine phosphatase activity 1.10948014643251 bayes_pls_golite062009
phosphoric ester hydrolase activity 1.07930079815389 bayes_pls_golite062009
catalytic activity 1.06283028154109 bayes_pls_golite062009
protein binding 0.874377197791589 bayes_pls_golite062009
nucleic acid binding 0.766259791679226 bayes_pls_golite062009
DNA binding 0.744259483210066 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle