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View Structure Prediction Details

Protein: ACOX2_ARATH
Organism: Arabidopsis thaliana
Length: 692 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACOX2_ARATH.

Description E-value Query
Range
Subject
Range
gi|25284581, gi|... - gi|3044212|gb|AAC13497.1| acyl-CoA oxidase [Arabidopsis thaliana], pir||T52120 acyl-CoA oxidase (EC ...
537.0 [0..1] [692..1]

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Predicted Domain #1
Region A:
Residues: [1-692]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESRREKNPM TEEESDGLIA ARRIQRLSLH LSPSLTPSPS LPLVQTETCS ARSKKLDVNG  60
   61 EALSLYMRGK HIDIQEKIFD FFNSRPDLQT PIEISKDDHR ELCMNQLIGL VREAGVRPFR 120
  121 YVADDPEKYF AIMEAVGSVD MSLGIKMGVQ YSLWGGSVIN LGTKKHRDKY FDGIDNLDYT 180
  181 GCFAMTELHH GSNVQGLQTT ATFDPLKDEF VIDTPNDGAI KWWIGNAAVH GKFATVFARL 240
  241 ILPTHDSKGV SDMGVHAFIV PIRDMKTHQT LPGVEIQDCG HKVGLNGVDN GALRFRSVRI 300
  301 PRDNLLNRFG DVSRDGTYTS SLPTINKRFG ATLGELVGGR VGLAYASVGV LKISATIAIR 360
  361 YSLLRQQFGP PKQPEVSILD YQSQQHKLMP MLASTYAYHF ATVYLVEKYS EMKKTHDEQL 420
  421 VADVHALSAG LKSYVTSYTA KALSVCREAC GGHGYAAVNR FGSLRNDHDI FQTFEGDNTV 480
  481 LLQQVAADLL KRYKEKFQGG TLTVTWSYLR ESMNTYLSQP NPVTARWEGE DHLRDPKFQL 540
  541 DAFRYRTSRL LQNVAARLQK HSKTLGGFGA WNRCLNHLLT LAESHIETVI LAKFIEAVKN 600
  601 CPDPSAKAAL KLACDLYALD RIWKDIGTYR NVDYVAPNKA KAIHKLTEYL SFQVRNVAKE 660
  661 LVDAFELPDH VTRAPIAMQS DAYSQYTQVV GF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 125.0
Match: 1is2A
Description: Peroxisomal acyl-CoA oxidase-II, domains 3 and 4; Peroxisomal acyl-CoA oxidase-II, domains 1 and 2
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
acyl-CoA oxidase activity 7.85164875699474 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-CH group of donors 7.69964776555327 bayes_pls_golite062009
acyl-CoA dehydrogenase activity 6.0252876667118 bayes_pls_golite062009
general RNA polymerase II transcription factor activity 5.78129971677842 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor 5.50948952617422 bayes_pls_golite062009
palmitoyl-CoA oxidase activity 5.41720462605663 bayes_pls_golite062009
oxidoreductase activity 3.99827953439804 bayes_pls_golite062009
RNA polymerase II transcription mediator activity 3.58504058273727 bayes_pls_golite062009
catalytic activity 2.41506805547596 bayes_pls_golite062009
transcription regulator activity 2.31681514717218 bayes_pls_golite062009
pristanoyl-CoA oxidase activity 2.26651221125135 bayes_pls_golite062009
binding 1.84962038137824 bayes_pls_golite062009
long-chain-acyl-CoA dehydrogenase activity 1.53039234278399 bayes_pls_golite062009
isovaleryl-CoA dehydrogenase activity 0.710715437094961 bayes_pls_golite062009
RNA polymerase II transcription factor activity 0.634990683062526 bayes_pls_golite062009
butyryl-CoA dehydrogenase activity 0.400090490265931 bayes_pls_golite062009
protein binding 0.0853302624128481 bayes_pls_golite062009

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