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View Structure Prediction Details

Protein: ACO32_ARATH
Organism: Arabidopsis thaliana
Length: 675 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACO32_ARATH.

Description E-value Query
Range
Subject
Range
gi|26333821, gi|... - gi|66793429|ref|NP_056544.2| acyl-Coenzyme A oxidase 1 [Mus musculus], gi|33989581|gb|AAH56448.1| Ac...
480.0 [0..35] [675..1]

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Predicted Domain #1
Region A:
Residues: [1-675]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSENVELRRA HILANHILRS PRPSSNPSLT PEVCFQYSPP ELNESYGFEV KEMRKLLDGH  60
   61 NLEERDWLYG LMMQSNLFNP KQRGGQIFVS PDYNQTMEQQ RQISMKRIFY LLEKGVFQGW 120
  121 LTETGPEAEL KKFALYEVCG IYDYSLSAKL GVHFLLWGNA VKFFGTKRHH EKWLKDTEDY 180
  181 VVKGCFAMTE LGHGTNVRGI ETVTTYDPTT EEFVINTPCE SAQKYWIGEA ANHANHAIVI 240
  241 SQLSMNGTNQ GIHVFIAQIR DHDGNTCPNV RIADCGHKIG LNGVDNGRIW FDNLRIPREN 300
  301 LLNSVADVLA DGKYVSSIKD PDQRFGAFLA PLTSGRVTIA SSAIYSAKLG LAVAIRYSLS 360
  361 RRAFSVAANG PEVLLLDYPS HQRRLLPLLA KTYAMSFAVN DLKMIYVKRT PETNKAIHVV 420
  421 SSGFKAVLTW HNMRTLQECR EAVGGQGLKT ENRVGHLKGE YDVQTTFEGD NNVLMQLVSK 480
  481 ALFAEYVSCK KRNKPFKGLG LEHMNSPRPV LPTQLTSSTL RCSQFQKSVF CLRERDLLER 540
  541 FTSEVAELQG RGESREFLFL LNHQLSEDLS KAFTEKAILQ TVLDAEAKLP PGSVKDVLGL 600
  601 VRSMYALISL EEDPSLLRYG HLSRDNVGDV RKEVSKLCGE LRPHALALVA SFGIPDAFLS 660
  661 PIAFNWVEAN AWSSL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 135.0
Match: 1is2A
Description: Peroxisomal acyl-CoA oxidase-II, domains 3 and 4; Peroxisomal acyl-CoA oxidase-II, domains 1 and 2
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
acyl-CoA oxidase activity 7.85164875699474 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-CH group of donors 7.69964776555327 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor 5.50948952617422 bayes_pls_golite062009
palmitoyl-CoA oxidase activity 5.41720462605663 bayes_pls_golite062009
acyl-CoA dehydrogenase activity 4.53237254207605 bayes_pls_golite062009
oxidoreductase activity 2.59974316612707 bayes_pls_golite062009
catalytic activity 2.41506805547596 bayes_pls_golite062009
pristanoyl-CoA oxidase activity 2.26651221125135 bayes_pls_golite062009
binding 0.749242681954192 bayes_pls_golite062009
protein binding 0.269787458920778 bayes_pls_golite062009
long-chain-acyl-CoA dehydrogenase activity 0.0911148049844599 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle