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View Structure Prediction Details

Protein: ACO12_ARATH
Organism: Arabidopsis thaliana
Length: 664 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACO12_ARATH.

Description E-value Query
Range
Subject
Range
ACOX1_ARATH - Peroxisomal acyl-coenzyme A oxidase 1 OS=Arabidopsis thaliana GN=ACX1 PE=1 SV=1
546.0 [0..1] [664..1]

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Predicted Domain #1
Region A:
Residues: [1-664]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERVDHLADE RNKAEFNVDD MKIVWAGSRH AFDVSNRMSR LVANDPVFEK SKRAVMSRKE  60
   61 LFKNTLRKSV HAWKLINELR LSDEEGLKLR SFMDQPGFLD LHWGMFVPAI KGQGTEQQQQ 120
  121 KWLSLATKMQ IIGCYAQTEL GHGSNVQGLE TTATFDPKTD QFIIHSPTQT SSKWWPGGLG 180
  181 KVSTHAVIYA RLITNGKDHG VHGFIVQLRS LDDHSPLPGI TVGDIGMKFG NGAYNSMDNG 240
  241 FLMFDHFRIP RDQMLMRLSK VTREGKYVAS DVPRQLVYGT MVYVRQSIVS NASTALARAV 300
  301 CIATRYSAVR RQFGSHDGGI ETQVINYKTQ QNRLFPLLAS AYAFRFVGEW LKWLYTDVTK 360
  361 RLEASDFATL PEAHACTAGL KSMTTSATSD GIEECRKLCG GHGYLWCSGL PELFAVYVPA 420
  421 CTYEGDNVVL QLQVARFLMK TVSQLGSGKA PSGTTAYMGR AKHLLQCSSG VRNARDWLNP 480
  481 GMVLEAFEAR ALRMAVTCAN NLSKFENQEQ GFSELLADLV EAATAHCQLI VVSKFIAKVE 540
  541 GDIEGKGVKK QLKNLCYIYA LYLLHKHLGD FLSTNSVTPE QASLANQQLR SLYSQVRPNA 600
  601 VALVDAFDYT DQYLGSVLGR YDGNVYPKLF EEALKDPLND SVVPDGYREY IRPLIKQRFR 660
  661 SAKL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 154.0
Match: 1w07A
Description: Arabidopsis thaliana acyl-CoA oxidase 1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
acyl-CoA oxidase activity 7.01556556997719 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-CH group of donors 6.78589465598787 bayes_pls_golite062009
palmitoyl-CoA oxidase activity 5.41720462605663 bayes_pls_golite062009
acyl-CoA dehydrogenase activity 5.1762698535957 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor 4.68801176945415 bayes_pls_golite062009
oxidoreductase activity 2.88983847563931 bayes_pls_golite062009
pristanoyl-CoA oxidase activity 2.26651221125135 bayes_pls_golite062009
catalytic activity 1.79436687732784 bayes_pls_golite062009
binding 0.749242681954192 bayes_pls_golite062009
protein binding 0.269787458920778 bayes_pls_golite062009
long-chain-acyl-CoA dehydrogenase activity 0.13696326544237 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle