YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: DPNPH_ARATH
Organism: Arabidopsis thaliana
Length: 373 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DPNPH_ARATH.

Description E-value Query
Range
Subject
Range
gi|2736075 - gi|2736075|gb|AAB94051.1| PAP-specific phosphatase; HAL2-like protein [Arabidopsis thaliana]
273.0 [0..1] [373..1]

Back

Predicted Domain #1
Region A:
Residues: [1-373]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVDSLETEI DTAVRVVHLA SSLCVKVQEK LHLPNGGHVK SKDDDSPVTV ADFGVQAIVS  60
   61 WVLAEVFGDQ NLSIVAEEDT ETLSEADSLG LLGAVSNAVN EALSEAQNYG LPKPVKPLGS 120
  121 SEILKAISRC NSVGGPKGRH WVLDPVDGTL GFVRGDQYAV ALALIENGKV LLGVLGCPNY 180
  181 PVKKECLSNG CNQAMKTKAV AGSVSKGCVM YAKRGSGQAW MQPLIVGGIP ESATLLKVSS 240
  241 VDDPVLATVC EPVERANSNH LFTAGLANSM GVRKQPMRVY SMVKYAAIAR GDAEVFMKFA 300
  301 QSSYKEKIWD HAAGVVIVEE AGGVVTDAGG RNLDFSKGVY LEGLDRGIIA CSGQVLHEKI 360
  361 IGAVYASWES SSL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 56.69897
Match: 1k9yA
Description: 3';5'-adenosine bisphosphatase, PAP phosphatase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 2.88760626317651 bayes_pls_golite062009
phosphatase activity 2.35747587631464 bayes_pls_golite062009
phosphoric ester hydrolase activity 2.15974571805101 bayes_pls_golite062009
catalytic activity 2.13229228332707 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 1.56919997723952 bayes_pls_golite062009
3'(2'),5'-bisphosphate nucleotidase activity 1.47057191917686 bayes_pls_golite062009
carbohydrate phosphatase activity 1.42298284519844 bayes_pls_golite062009
fructose 1,6-bisphosphate 1-phosphatase activity 1.27303304175364 bayes_pls_golite062009
binding 0.836667162379626 bayes_pls_golite062009
nucleotidase activity 0.335234714648046 bayes_pls_golite062009
protein binding 0.0338617836572318 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle