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View Structure Prediction Details

Protein: DPNP3_ARATH
Organism: Arabidopsis thaliana
Length: 357 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DPNP3_ARATH.

Description E-value Query
Range
Subject
Range
gi|21618152 - gi|21618152|gb|AAM67202.1| 3(2),5-bisphosphate nucleotidase [Arabidopsis thaliana]
268.0 [0..1] [357..1]

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Predicted Domain #1
Region A:
Residues: [1-357]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYDEMLSAA KKAVSLAARL SNEVRKSLLV TDVWNKSDDS PVTVADYGSQ AVVSLVLERE  60
   61 LQNEPVSLVA EEDSGELRKI AAETVLARIT ELVKDTLASD ESYAIASPLT SDDVLNAIDR 120
  121 GKSEGGPKGR HWILDPIGGT RGFIRGEQYA IGLALLVEGK VVLGVMACPK LPLASTAGNA 180
  181 LKSLPEKVGC LFYGSVGNGT YVQSLSVDSL PAKVEVSSID DPAKASFFES YHTPVPIHNT 240
  241 IATKLGIKES PIKINSQTKY AALSRGDGEV YLRFTRKARP ESIWNHAAGS IIVSEAGGKV 300
  301 TDAAGNPLDF SKGKYLDYKR GIVVTTQKLL PRLLTAVRES IKEEEEEEEK AASLKLH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 57.0
Match: 1k9yA
Description: 3';5'-adenosine bisphosphatase, PAP phosphatase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 2.88760626317651 bayes_pls_golite062009
phosphatase activity 2.35747587631464 bayes_pls_golite062009
phosphoric ester hydrolase activity 2.15974571805101 bayes_pls_golite062009
catalytic activity 2.13229228332707 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 1.56919997723952 bayes_pls_golite062009
3'(2'),5'-bisphosphate nucleotidase activity 1.47057191917686 bayes_pls_golite062009
carbohydrate phosphatase activity 1.42298284519844 bayes_pls_golite062009
fructose 1,6-bisphosphate 1-phosphatase activity 1.27303304175364 bayes_pls_golite062009
binding 0.836667162379626 bayes_pls_golite062009
nucleotidase activity 0.335234714648046 bayes_pls_golite062009
protein binding 0.0338617836572318 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle