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View Structure Prediction Details

Protein: CE34961
Organism: Caenorhabditis elegans
Length: 429 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE34961.

Description E-value Query
Range
Subject
Range
gi|109895306, gi... - gi|110431374|ref|NP_001036035.1| chitinase 7 [Tribolium castaneum], gi|109895306|gb|ABG47445.1| chit...
348.0 [0..45] [424..63]

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Predicted Domain #1
Region A:
Residues: [1-429]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAKHEYNKL SLVHLPRKEV HSEKRIPSIL TRTIAVLFVF ALLALVSIGS EGVPQLRNSR  60
   61 DLTKSPCKKR VVGYYSEWEG TEITRSQLGK LTHAVFAFIH MDSEGKLQFK TNQKERFEKL 120
  121 KTAVKNANSD TKVMISIGGD HNSENFGSVL SDSEKKSMFI DSIARFIRQH KIHGVDIYWK 180
  181 WLGNSETEHH DFPSFLKDLK EKLKTVRDDS IISIVAPQAK MDRRHDGYKF DDFMEYIDFV 240
  241 NVFSMDYYGP WPNQWGTPTG PSAPLYGGIG VKKHFNVDST MKYYTCMTED PSKFNMVIPF 300
  301 YVRLWKNVKE PISSGTEVFR RADLKNGAAV GNSYMSRWTV DHEGWELTPA LWDDVTKTPY 360
  361 VWNQETGNFL TFENKKSIEA KLAYAIEHNL GGVWIHLVDK DNENEELLRA VASKKFCASE 420
  421 SENKVTYDC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 88.0
Match: 1rd6A
Description: Crystal Structure of S. Marcescens Chitinase A Mutant W167A
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
chitinase activity 6.40555694403866 bayes_pls_golite062009
hydrolase activity, hydrolyzing O-glycosyl compounds 1.91170236789651 bayes_pls_golite062009
amylase activity 1.38959979746158 bayes_pls_golite062009
hydrolase activity, acting on glycosyl bonds 1.34796838721403 bayes_pls_golite062009
chitin binding 1.29046765706168 bayes_pls_golite062009
binding 0.931465888895274 bayes_pls_golite062009
growth factor activity 0.803631304661827 bayes_pls_golite062009
glucosidase activity 0.766503513427695 bayes_pls_golite062009
receptor binding 0.607116029438976 bayes_pls_golite062009
catalytic activity 0.534516847146079 bayes_pls_golite062009
carbohydrate binding 0.4998423581103 bayes_pls_golite062009
transferase activity, transferring hexosyl groups 0.266938437560648 bayes_pls_golite062009
hexosaminidase activity 0.21148675734804 bayes_pls_golite062009
hydrolase activity 0.178746202646272 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle