YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE34698
Organism: Caenorhabditis elegans
Length: 316 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE34698.

Description E-value Query
Range
Subject
Range
gi|7496167 - gi|7496167|pir||T15540 hypothetical protein C17C3.1 - Caenorhabditis elegans
308.0 [0..11] [316..161]

Back

Predicted Domain #1
Region A:
Residues: [1-316]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALSVEEQGR KMYTFEKIDE NNFRADYLFH ARQNPNGSAY GGLLFSQALA AAENTVSDEF  60
   61 KPNSIHAYFV SAVIYSTPAI YKVKRIKDGK TFIIRTVEAV QNDRICFVLQ VSFHISEKSG 120
  121 MIHQDIMPKV PNPESLMSMK DAVISTKKLV NDGGLVLKPA MLHRLMVLDN KAFVINNDMF 180
  181 EARCTNLGNW YGYCSDLKHQ ARVWMRTRER LNTGDKRLHR WLLACMSDAI LLPAGMSAHF 240
  241 SQGFEDSVHA SLDHCLYFHN HDFRVDDWFL LDCKSSVSAE GICFIQGKIW RRDGVLIASC 300
  301 HQEAIVRGKN GQTSKL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 78.0
Match: 1c8uA
Description: Thioesterase II (TesB)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
acyl-CoA thioesterase activity 2.60197973503923 bayes_pls_golite062009
CoA hydrolase activity 2.3187640589669 bayes_pls_golite062009
3-hydroxyacyl-CoA dehydrogenase activity 1.14159464719086 bayes_pls_golite062009
thiolester hydrolase activity 1.14125301545576 bayes_pls_golite062009
catalytic activity 0.74605540351792 bayes_pls_golite062009
binding 0.358549779743531 bayes_pls_golite062009
hydrolase activity 0.093543122203219 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle